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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:30.2 nTPM
HPA:30.2 nTPM
GTEx:23.4 nTPM
FANTOM5:18.0 Scaled Tags Per Million
Pig:7.2 nTPM
Mouse:21.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046817
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
2529 Female, age 94, left hemisphere 31.2
1855 Male, age 76, left hemisphere 29.8
1898 Male, age 80, left hemisphere 28.1
1911 Female, age 85, right hemisphere 28.0
2621 Female, age 67, right hemisphere 27.2
2148 Female, age 91, left hemisphere 26.7
Dentate gyrus
nTPM: 28.8
2530 Female, age 94, left hemisphere 30.9
2246 Female, age 85, both hemispheres 29.0
2528 Male, age 74, both hemispheres 28.8
2531 Female, age 67, both hemispheres 28.7
2010 Male, age 76, both hemispheres 28.6
1927 Female, age 91, both hemispheres 26.5
Entorhinal gyrus
nTPM: 27.8
2764 Male, age 80, right hemisphere 29.1
1787 Male, age 76, left hemisphere 28.5
2686 Male, age 75, right hemisphere 28.5
2117 Female, age 91, right hemisphere 27.1
2613 Female, age 94, left hemisphere 27.1
1938 Female, age 85, left hemisphere 26.6
Hippocampus, CA1
nTPM: 28.5
2527 Male, age 74, both hemispheres 30.6
2045 Male, age 76, both hemispheres 29.2
2082 Female, age 91, right hemisphere 27.8
1873 Female, age 85, both hemispheres 27.5
2749 Male, age 80, left hemisphere 27.4
Hippocampus, CA2
nTPM: 28.4
2437 Female, age 94, left hemisphere 30.7
2249 Male, age 74, both hemispheres 29.5
2113 Female, age 91, right hemisphere 28.4
1940 Female, age 85, left hemisphere 27.9
1963 Male, age 80, left hemisphere 27.1
1892 Male, age 76, both hemispheres 26.8
Hippocampus, CA3
nTPM: 28.9
2620 Female, age 94, left hemisphere 31.8
2436 Male, age 74, both hemispheres 30.1
1891 Female, age 85, both hemispheres 29.1
2861 Female, age 67, both hemispheres 28.2
1867 Male, age 76, both hemispheres 27.6
2137 Male, age 80, left hemisphere 26.5
Parahippocampal cortex
nTPM: 28.8
2622 Female, age 67, right hemisphere 31.2
2245 Female, age 91, both hemispheres 30.3
2692 Male, age 74, both hemispheres 30.3
1990 Female, age 91, right hemisphere 29.3
2018 Male, age 76, both hemispheres 29.0
2250 Female, age 67, right hemisphere 28.2
2532 Female, age 72, left hemisphere 27.9
1850 Male, age 80, both hemispheres 27.4
2693 Female, age 94, both hemispheres 27.2
1933 Female, age 85, both hemispheres 27.1
Perirhinal gyrus
nTPM: 27.3
2848 Male, age 76, right hemisphere 28.4
2521 Female, age 94, right hemisphere 28.0
1847 Female, age 91, left hemisphere 27.3
1794 Male, age 80, right hemisphere 26.6
1841 Female, age 85, right hemisphere 26.2
Subiculum
nTPM: 30.2
2438 Female, age 94, left hemisphere 34.3
2619 Male, age 74, both hemispheres 32.7
2042 Male, age 76, both hemispheres 30.1
1977 Female, age 85, both hemispheres 28.4
1901 Male, age 80, both hemispheres 28.1
2729 Female, age 91, right hemisphere 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 38.2
Min nTPM: 12.9
Std nTPM: 4.8
Median nTPM: 22.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 37.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 36.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 34.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 33.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 32.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 32.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 32.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 32.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.0
FF:10153-102I9 76 years, female 21.5
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.9
Sample A Female 7.6
Sample B Female 7.1
Sample C Male 7.2
Sample D Male 6.9
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.9
Sample A Female 6.2
Sample B Female 6.3
Sample C Male 6.1
Sample D Male 5.9
Subiculum
nTPM: 5.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.5
Sample A Female 6.2
Sample B Female 5.6
Sample C Male 5.7
Sample D Male 5.5
Ventral hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.2
Sample A Female 6.5
Sample B Female 5.2
Sample C Male 7.6
Sample D Male 7.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.8
Sample A Male 19.5
Sample B Male 21.5
Sample C Female 20.8
Sample D Female 16.8
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 21.6
Sample A Male 22.4
Sample B Male 21.9
Sample C Female 21.8
Sample D Female 21.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69549006 Antisense, RP_050426_02_G02, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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