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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.0 nTPM
HPA:19.0 nTPM
GTEx:24.9 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:27.6 nTPM
Mouse:52.0 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.1
1898 Male, age 80, left hemisphere 19.1
2148 Female, age 91, left hemisphere 18.0
2621 Female, age 67, right hemisphere 17.3
2529 Female, age 94, left hemisphere 16.6
1855 Male, age 76, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.9
Dentate gyrus
nTPM: 17.8
1927 Female, age 91, both hemispheres 22.6
2010 Male, age 76, both hemispheres 20.4
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 16.1
2246 Female, age 85, both hemispheres 15.7
2531 Female, age 67, both hemispheres 13.5
Entorhinal gyrus
nTPM: 16.8
2764 Male, age 80, right hemisphere 20.3
2117 Female, age 91, right hemisphere 16.8
1938 Female, age 85, left hemisphere 16.7
1787 Male, age 76, left hemisphere 16.1
2613 Female, age 94, left hemisphere 15.6
2686 Male, age 75, right hemisphere 15.1
Hippocampus, CA1
nTPM: 18.4
2749 Male, age 80, left hemisphere 24.9
1873 Female, age 85, both hemispheres 19.3
2045 Male, age 76, both hemispheres 18.2
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 13.8
Hippocampus, CA2
nTPM: 19.0
1892 Male, age 76, both hemispheres 24.8
1963 Male, age 80, left hemisphere 24.7
2249 Male, age 74, both hemispheres 17.1
2437 Female, age 94, left hemisphere 16.5
1940 Female, age 85, left hemisphere 16.3
2113 Female, age 91, right hemisphere 14.9
Hippocampus, CA3
nTPM: 16.9
1867 Male, age 76, both hemispheres 21.2
2137 Male, age 80, left hemisphere 20.2
2436 Male, age 74, both hemispheres 16.6
1891 Female, age 85, both hemispheres 16.1
2861 Female, age 67, both hemispheres 14.3
2620 Female, age 94, left hemisphere 13.1
Parahippocampal cortex
nTPM: 16.3
1850 Male, age 80, both hemispheres 19.8
1990 Female, age 91, right hemisphere 18.8
2018 Male, age 76, both hemispheres 18.4
1933 Female, age 85, both hemispheres 17.7
2532 Female, age 72, left hemisphere 16.4
2245 Female, age 91, both hemispheres 15.7
2622 Female, age 67, right hemisphere 15.1
2692 Male, age 74, both hemispheres 14.3
2250 Female, age 67, right hemisphere 13.2
2693 Female, age 94, both hemispheres 13.2
Perirhinal gyrus
nTPM: 18.0
1847 Female, age 91, left hemisphere 20.8
1794 Male, age 80, right hemisphere 20.1
1841 Female, age 85, right hemisphere 18.9
2848 Male, age 76, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.8
Subiculum
nTPM: 16.5
1901 Male, age 80, both hemispheres 18.3
1977 Female, age 85, both hemispheres 17.9
2042 Male, age 76, both hemispheres 16.1
2438 Female, age 94, left hemisphere 16.1
2619 Male, age 74, both hemispheres 15.9
2729 Female, age 91, right hemisphere 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 40.4
Min nTPM: 14.6
Std nTPM: 4.4
Median nTPM: 24.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 37.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 34.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 34.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 34.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 33.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10153-102I9 76 years, female 44.2
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 36.7
Min nTPM: 19.8
Sample A Female 36.7
Sample B Female 27.7
Sample C Male 26.3
Sample D Male 19.8
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 30.2
Min nTPM: 23.0
Sample A Female 30.2
Sample B Female 25.1
Sample C Male 26.5
Sample D Male 23.0
Subiculum
nTPM: 25.1
Samples: 4

Max nTPM: 31.6
Min nTPM: 21.7
Sample A Female 31.6
Sample B Female 22.0
Sample C Male 25.1
Sample D Male 21.7
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 18.5
Sample A Female 28.6
Sample B Female 18.5
Sample C Male 31.1
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.0
Samples: 4

Max nTPM: 58.5
Min nTPM: 47.3
Sample A Male 51.3
Sample B Male 47.3
Sample C Female 50.9
Sample D Female 58.5
Hippocampal formation
nTPM: 50.8
Samples: 4

Max nTPM: 55.4
Min nTPM: 46.6
Sample A Male 51.1
Sample B Male 50.1
Sample C Female 55.4
Sample D Female 46.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
532695 Antisense, RP_040825_01_E06, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

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