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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:22.8 nTPM
HPA:22.8 nTPM
GTEx:28.2 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:20.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034996Antibody HPA034997Antibody CAB004648
Glial cells Not detectedLowMedium
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.5
1898 Male, age 80, left hemisphere 24.8
1855 Male, age 76, left hemisphere 21.3
2529 Female, age 94, left hemisphere 21.3
1911 Female, age 85, right hemisphere 21.0
2621 Female, age 67, right hemisphere 21.0
2148 Female, age 91, left hemisphere 19.9
Dentate gyrus
nTPM: 21.5
2246 Female, age 85, both hemispheres 22.3
1927 Female, age 91, both hemispheres 22.2
2010 Male, age 76, both hemispheres 22.1
2528 Male, age 74, both hemispheres 21.6
2530 Female, age 94, left hemisphere 21.3
2531 Female, age 67, both hemispheres 19.4
Entorhinal gyrus
nTPM: 21.7
1938 Female, age 85, left hemisphere 23.0
2613 Female, age 94, left hemisphere 22.4
1787 Male, age 76, left hemisphere 22.1
2686 Male, age 75, right hemisphere 21.1
2117 Female, age 91, right hemisphere 20.9
2764 Male, age 80, right hemisphere 20.9
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 21.8
2045 Male, age 76, both hemispheres 20.7
2082 Female, age 91, right hemisphere 20.7
Hippocampus, CA2
nTPM: 22.8
2249 Male, age 74, both hemispheres 26.5
1963 Male, age 80, left hemisphere 23.5
1892 Male, age 76, both hemispheres 23.1
2437 Female, age 94, left hemisphere 22.3
1940 Female, age 85, left hemisphere 21.4
2113 Female, age 91, right hemisphere 20.1
Hippocampus, CA3
nTPM: 22.2
2436 Male, age 74, both hemispheres 25.5
2137 Male, age 80, left hemisphere 22.9
1867 Male, age 76, both hemispheres 22.8
1891 Female, age 85, both hemispheres 22.0
2620 Female, age 94, left hemisphere 20.4
2861 Female, age 67, both hemispheres 19.4
Parahippocampal cortex
nTPM: 21.0
2250 Female, age 67, right hemisphere 23.1
1850 Male, age 80, both hemispheres 22.6
1990 Female, age 91, right hemisphere 22.6
2018 Male, age 76, both hemispheres 21.6
1933 Female, age 85, both hemispheres 21.1
2532 Female, age 72, left hemisphere 20.7
2693 Female, age 94, both hemispheres 20.4
2692 Male, age 74, both hemispheres 19.8
2245 Female, age 91, both hemispheres 19.5
2622 Female, age 67, right hemisphere 18.6
Perirhinal gyrus
nTPM: 22.6
1794 Male, age 80, right hemisphere 24.2
1847 Female, age 91, left hemisphere 23.7
1841 Female, age 85, right hemisphere 22.5
2521 Female, age 94, right hemisphere 22.1
2848 Male, age 76, right hemisphere 20.5
Subiculum
nTPM: 21.5
1977 Female, age 85, both hemispheres 23.1
1901 Male, age 80, both hemispheres 22.9
2042 Male, age 76, both hemispheres 21.4
2619 Male, age 74, both hemispheres 21.1
2729 Female, age 91, right hemisphere 20.7
2438 Female, age 94, left hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 56.6
Min nTPM: 15.3
Std nTPM: 5.1
Median nTPM: 28.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 44.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 44.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 39.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 39.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 39.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 36.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 36.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.0
Sample A Female 16.5
Sample B Female 11.8
Sample C Male 15.2
Sample D Male 10.0
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.8
Sample A Female 12.7
Sample B Female 15.4
Sample C Male 12.2
Sample D Male 11.8
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.5
Sample A Female 19.4
Sample B Female 13.5
Sample C Male 14.1
Sample D Male 13.8
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.0
Sample A Female 15.9
Sample B Female 12.0
Sample C Male 16.4
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.6
Sample A Male 20.3
Sample B Male 21.2
Sample C Female 23.2
Sample D Female 18.6
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 22.6
Min nTPM: 16.0
Sample A Male 22.6
Sample B Male 20.0
Sample C Female 16.0
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
564761 Antisense, RP_040826_01_D06, Mouse strain C57BL/6J (56 days, male) 0.5

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