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H2AC6
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:34.5 nTPM
HPA:34.5 nTPM
GTEx:15.2 nTPM
FANTOM5:151.4 Scaled Tags Per Million
Pig:10.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.5
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
1898 Male, age 80, left hemisphere 41.2
1911 Female, age 85, right hemisphere 33.6
1855 Male, age 76, left hemisphere 28.6
2148 Female, age 91, left hemisphere 28.0
2621 Female, age 67, right hemisphere 24.6
2529 Female, age 94, left hemisphere 20.3
Dentate gyrus
nTPM: 27.7
1927 Female, age 91, both hemispheres 35.0
2531 Female, age 67, both hemispheres 30.7
2246 Female, age 85, both hemispheres 29.3
2528 Male, age 74, both hemispheres 26.6
2530 Female, age 94, left hemisphere 24.1
2010 Male, age 76, both hemispheres 20.3
Entorhinal gyrus
nTPM: 24.1
2764 Male, age 80, right hemisphere 34.1
2117 Female, age 91, right hemisphere 30.2
1938 Female, age 85, left hemisphere 29.9
2613 Female, age 94, left hemisphere 27.5
1787 Male, age 76, left hemisphere 18.9
2686 Male, age 75, right hemisphere 3.9
Hippocampus, CA1
nTPM: 34.5
2045 Male, age 76, both hemispheres 46.2
2749 Male, age 80, left hemisphere 41.0
1873 Female, age 85, both hemispheres 34.7
2082 Female, age 91, right hemisphere 28.6
2527 Male, age 74, both hemispheres 21.7
Hippocampus, CA2
nTPM: 23.2
1963 Male, age 80, left hemisphere 29.0
2113 Female, age 91, right hemisphere 27.4
2249 Male, age 74, both hemispheres 24.4
1940 Female, age 85, left hemisphere 23.0
2437 Female, age 94, left hemisphere 19.8
1892 Male, age 76, both hemispheres 15.5
Hippocampus, CA3
nTPM: 27.3
2620 Female, age 94, left hemisphere 35.1
1891 Female, age 85, both hemispheres 30.4
2137 Male, age 80, left hemisphere 29.5
2436 Male, age 74, both hemispheres 26.8
2861 Female, age 67, both hemispheres 21.9
1867 Male, age 76, both hemispheres 19.9
Parahippocampal cortex
nTPM: 14.6
2245 Female, age 91, both hemispheres 23.4
1850 Male, age 80, both hemispheres 21.0
2250 Female, age 67, right hemisphere 21.0
1933 Female, age 85, both hemispheres 19.7
1990 Female, age 91, right hemisphere 17.3
2532 Female, age 72, left hemisphere 16.4
2018 Male, age 76, both hemispheres 13.6
2693 Female, age 94, both hemispheres 9.7
2622 Female, age 67, right hemisphere 4.2
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 21.4
1794 Male, age 80, right hemisphere 31.5
1847 Female, age 91, left hemisphere 23.1
2521 Female, age 94, right hemisphere 21.4
1841 Female, age 85, right hemisphere 20.4
2848 Male, age 76, right hemisphere 10.7
Subiculum
nTPM: 21.1
1977 Female, age 85, both hemispheres 29.6
2729 Female, age 91, right hemisphere 26.5
1901 Male, age 80, both hemispheres 25.8
2042 Male, age 76, both hemispheres 18.1
2619 Male, age 74, both hemispheres 14.0
2438 Female, age 94, left hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 68.9
Min nTPM: 3.1
Std nTPM: 8.7
Median nTPM: 13.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 68.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 45.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 44.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 41.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 41.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 38.9
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 33.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 32.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 31.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.4
FF:10153-102I9 76 years, female 161.5
FF:10169-103B7 60 years, female 141.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 7.8
Sample A Female 13.6
Sample B Female 8.6
Sample C Male 11.2
Sample D Male 7.8
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Female 9.1
Sample B Female 8.6
Sample C Male 8.5
Sample D Male 6.4
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 12.4
Min nTPM: 6.7
Sample A Female 12.4
Sample B Female 7.9
Sample C Male 6.7
Sample D Male 7.1
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.6
Sample A Female 9.5
Sample B Female 7.6
Sample C Male 11.1
Sample D Male 8.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.