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PPA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:125.8 nTPM
HPA:125.8 nTPM
GTEx:127.1 nTPM
FANTOM5:224.7 Scaled Tags Per Million
Pig:91.7 nTPM
Mouse:106.8 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019878Antibody HPA020096
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 125.8
Sample id Sample description nTPM
Hippocampus
nTPM: 119.3
1898 Male, age 80, left hemisphere 136.8
2529 Female, age 94, left hemisphere 119.2
1855 Male, age 76, left hemisphere 118.8
2621 Female, age 67, right hemisphere 118.1
1911 Female, age 85, right hemisphere 112.3
2148 Female, age 91, left hemisphere 110.6
Dentate gyrus
nTPM: 118.4
2530 Female, age 94, left hemisphere 123.1
2010 Male, age 76, both hemispheres 122.0
2528 Male, age 74, both hemispheres 118.7
1927 Female, age 91, both hemispheres 118.1
2246 Female, age 85, both hemispheres 117.3
2531 Female, age 67, both hemispheres 111.1
Entorhinal gyrus
nTPM: 116.8
1938 Female, age 85, left hemisphere 123.9
1787 Male, age 76, left hemisphere 121.2
2764 Male, age 80, right hemisphere 120.8
2117 Female, age 91, right hemisphere 116.0
2613 Female, age 94, left hemisphere 109.5
2686 Male, age 75, right hemisphere 109.2
Hippocampus, CA1
nTPM: 118.8
2749 Male, age 80, left hemisphere 129.7
1873 Female, age 85, both hemispheres 121.4
2527 Male, age 74, both hemispheres 120.0
2045 Male, age 76, both hemispheres 111.5
2082 Female, age 91, right hemisphere 111.3
Hippocampus, CA2
nTPM: 122.2
1963 Male, age 80, left hemisphere 130.7
2249 Male, age 74, both hemispheres 130.1
1892 Male, age 76, both hemispheres 125.8
1940 Female, age 85, left hemisphere 117.5
2437 Female, age 94, left hemisphere 117.5
2113 Female, age 91, right hemisphere 111.4
Hippocampus, CA3
nTPM: 115.7
1867 Male, age 76, both hemispheres 120.6
2436 Male, age 74, both hemispheres 119.5
1891 Female, age 85, both hemispheres 118.6
2137 Male, age 80, left hemisphere 118.0
2620 Female, age 94, left hemisphere 109.1
2861 Female, age 67, both hemispheres 108.5
Parahippocampal cortex
nTPM: 117.8
1850 Male, age 80, both hemispheres 132.6
1990 Female, age 91, right hemisphere 123.3
1933 Female, age 85, both hemispheres 121.6
2250 Female, age 67, right hemisphere 120.6
2018 Male, age 76, both hemispheres 120.4
2532 Female, age 72, left hemisphere 117.2
2693 Female, age 94, both hemispheres 115.7
2245 Female, age 91, both hemispheres 112.8
2692 Male, age 74, both hemispheres 109.9
2622 Female, age 67, right hemisphere 104.3
Perirhinal gyrus
nTPM: 125.8
1794 Male, age 80, right hemisphere 130.0
1841 Female, age 85, right hemisphere 128.8
1847 Female, age 91, left hemisphere 128.0
2848 Male, age 76, right hemisphere 122.8
2521 Female, age 94, right hemisphere 119.5
Subiculum
nTPM: 118.4
1977 Female, age 85, both hemispheres 125.4
2438 Female, age 94, left hemisphere 122.9
1901 Male, age 80, both hemispheres 119.2
2042 Male, age 76, both hemispheres 114.5
2619 Male, age 74, both hemispheres 114.3
2729 Female, age 91, right hemisphere 114.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.1
Samples: 197

Max nTPM: 280.4
Min nTPM: 71.2
Std nTPM: 29.4
Median nTPM: 122.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 280.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 237.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 216.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 214.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 213.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 184.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 183.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 175.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 174.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 172.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 171.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 224.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 224.7
FF:10169-103B7 60 years, female 306.5
FF:10153-102I9 76 years, female 142.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.7
Samples: 4

Max nTPM: 131.6
Min nTPM: 64.3
Sample A Female 131.6
Sample B Female 88.4
Sample C Male 82.3
Sample D Male 64.3
Entorhinal cortex
nTPM: 75.8
Samples: 4

Max nTPM: 99.7
Min nTPM: 62.1
Sample A Female 78.4
Sample B Female 99.7
Sample C Male 62.8
Sample D Male 62.1
Subiculum
nTPM: 64.5
Samples: 4

Max nTPM: 81.2
Min nTPM: 51.8
Sample A Female 81.2
Sample B Female 64.9
Sample C Male 51.8
Sample D Male 60.0
Ventral hippocampus
nTPM: 74.4
Samples: 4

Max nTPM: 96.2
Min nTPM: 55.6
Sample A Female 96.2
Sample B Female 55.6
Sample C Male 70.0
Sample D Male 75.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.1
Samples: 4

Max nTPM: 111.7
Min nTPM: 96.9
Sample A Male 96.9
Sample B Male 105.8
Sample C Female 111.7
Sample D Female 106.0
Hippocampal formation
nTPM: 106.8
Samples: 4

Max nTPM: 116.6
Min nTPM: 100.1
Sample A Male 116.6
Sample B Male 100.1
Sample C Female 106.9
Sample D Female 103.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
74635292 Antisense, RP_060215_03_F04, Mouse strain C57BL/6J (56 days, male) 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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