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HIGD1A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:139.4 nTPM
HPA:139.4 nTPM
GTEx:194.6 nTPM
FANTOM5:103.4 Scaled Tags Per Million
Pig:82.2 nTPM
Mouse:84.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043336
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.4
Sample id Sample description nTPM
Hippocampus
nTPM: 133.8
1898 Male, age 80, left hemisphere 158.0
1855 Male, age 76, left hemisphere 136.0
1911 Female, age 85, right hemisphere 130.9
2529 Female, age 94, left hemisphere 128.7
2148 Female, age 91, left hemisphere 125.2
2621 Female, age 67, right hemisphere 123.9
Dentate gyrus
nTPM: 133.2
2010 Male, age 76, both hemispheres 147.8
1927 Female, age 91, both hemispheres 142.0
2246 Female, age 85, both hemispheres 134.0
2530 Female, age 94, left hemisphere 132.1
2528 Male, age 74, both hemispheres 125.0
2531 Female, age 67, both hemispheres 118.2
Entorhinal gyrus
nTPM: 127.0
1938 Female, age 85, left hemisphere 139.1
1787 Male, age 76, left hemisphere 130.6
2117 Female, age 91, right hemisphere 130.5
2764 Male, age 80, right hemisphere 125.5
2686 Male, age 75, right hemisphere 120.0
2613 Female, age 94, left hemisphere 116.2
Hippocampus, CA1
nTPM: 138.5
2749 Male, age 80, left hemisphere 149.6
1873 Female, age 85, both hemispheres 146.5
2045 Male, age 76, both hemispheres 137.4
2527 Male, age 74, both hemispheres 131.8
2082 Female, age 91, right hemisphere 127.0
Hippocampus, CA2
nTPM: 134.2
1892 Male, age 76, both hemispheres 153.5
1963 Male, age 80, left hemisphere 141.1
2249 Male, age 74, both hemispheres 134.3
2113 Female, age 91, right hemisphere 125.8
1940 Female, age 85, left hemisphere 125.3
2437 Female, age 94, left hemisphere 125.1
Hippocampus, CA3
nTPM: 133.2
1867 Male, age 76, both hemispheres 147.0
2137 Male, age 80, left hemisphere 140.6
1891 Female, age 85, both hemispheres 136.9
2436 Male, age 74, both hemispheres 134.6
2620 Female, age 94, left hemisphere 121.8
2861 Female, age 67, both hemispheres 118.0
Parahippocampal cortex
nTPM: 131.8
1850 Male, age 80, both hemispheres 146.5
1933 Female, age 85, both hemispheres 138.6
2018 Male, age 76, both hemispheres 136.1
2250 Female, age 67, right hemisphere 134.8
1990 Female, age 91, right hemisphere 133.5
2245 Female, age 91, both hemispheres 129.1
2693 Female, age 94, both hemispheres 128.4
2692 Male, age 74, both hemispheres 125.5
2532 Female, age 72, left hemisphere 123.2
2622 Female, age 67, right hemisphere 122.2
Perirhinal gyrus
nTPM: 139.4
1841 Female, age 85, right hemisphere 143.4
1794 Male, age 80, right hemisphere 142.9
1847 Female, age 91, left hemisphere 142.4
2521 Female, age 94, right hemisphere 135.6
2848 Male, age 76, right hemisphere 132.5
Subiculum
nTPM: 129.3
1901 Male, age 80, both hemispheres 139.5
1977 Female, age 85, both hemispheres 133.5
2042 Male, age 76, both hemispheres 129.2
2729 Female, age 91, right hemisphere 126.9
2438 Female, age 94, left hemisphere 123.6
2619 Male, age 74, both hemispheres 123.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 194.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 194.6
Samples: 197

Max nTPM: 551.8
Min nTPM: 80.8
Std nTPM: 57.1
Median nTPM: 187.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 551.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 436.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 382.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 332.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 297.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 291.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 288.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 287.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 287.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 286.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 281.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.4
FF:10169-103B7 60 years, female 142.3
FF:10153-102I9 76 years, female 64.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.6
Samples: 4

Max nTPM: 105.1
Min nTPM: 50.4
Sample A Female 105.1
Sample B Female 70.5
Sample C Male 84.3
Sample D Male 50.4
Entorhinal cortex
nTPM: 82.2
Samples: 4

Max nTPM: 119.6
Min nTPM: 61.3
Sample A Female 68.8
Sample B Female 119.6
Sample C Male 79.1
Sample D Male 61.3
Subiculum
nTPM: 67.7
Samples: 4

Max nTPM: 89.9
Min nTPM: 56.2
Sample A Female 89.9
Sample B Female 58.6
Sample C Male 56.2
Sample D Male 65.9
Ventral hippocampus
nTPM: 62.5
Samples: 4

Max nTPM: 74.9
Min nTPM: 51.0
Sample A Female 74.9
Sample B Female 51.0
Sample C Male 57.5
Sample D Male 66.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.6
Samples: 4

Max nTPM: 81.8
Min nTPM: 62.1
Sample A Male 81.3
Sample B Male 81.3
Sample C Female 81.8
Sample D Female 62.1
Hippocampal formation
nTPM: 84.6
Samples: 4

Max nTPM: 100.9
Min nTPM: 75.8
Sample A Male 100.9
Sample B Male 78.4
Sample C Female 75.8
Sample D Female 83.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
2291 Antisense, RP_040604_01_A01, Mouse strain C57BL/6J (56 days, male) 0.1
2292 Antisense, RP_040604_01_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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