ABOUTMENU
HELP
NEWS
CCDC149
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:11.7 nTPM
FANTOM5:33.6 Scaled Tags Per Million
Pig:48.1 nTPM
Mouse:33.9 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044158Antibody HPA047913
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
2148 Female, age 91, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.4
1898 Male, age 80, left hemisphere 10.3
2529 Female, age 94, left hemisphere 9.4
1855 Male, age 76, left hemisphere 9.2
1911 Female, age 85, right hemisphere 8.9
Dentate gyrus
nTPM: 9.8
2531 Female, age 67, both hemispheres 12.3
1927 Female, age 91, both hemispheres 11.4
2246 Female, age 85, both hemispheres 10.1
2530 Female, age 94, left hemisphere 8.8
2528 Male, age 74, both hemispheres 8.5
2010 Male, age 76, both hemispheres 7.7
Entorhinal gyrus
nTPM: 11.3
2764 Male, age 80, right hemisphere 12.9
1787 Male, age 76, left hemisphere 12.1
1938 Female, age 85, left hemisphere 11.6
2686 Male, age 75, right hemisphere 11.4
2613 Female, age 94, left hemisphere 11.2
2117 Female, age 91, right hemisphere 8.7
Hippocampus, CA1
nTPM: 10.2
2749 Male, age 80, left hemisphere 12.2
2045 Male, age 76, both hemispheres 10.4
1873 Female, age 85, both hemispheres 10.1
2527 Male, age 74, both hemispheres 9.6
2082 Female, age 91, right hemisphere 9.0
Hippocampus, CA2
nTPM: 9.7
1892 Male, age 76, both hemispheres 12.8
1963 Male, age 80, left hemisphere 10.9
2437 Female, age 94, left hemisphere 10.3
1940 Female, age 85, left hemisphere 8.8
2113 Female, age 91, right hemisphere 8.0
2249 Male, age 74, both hemispheres 7.4
Hippocampus, CA3
nTPM: 11.2
2620 Female, age 94, left hemisphere 12.3
2861 Female, age 67, both hemispheres 12.3
1867 Male, age 76, both hemispheres 12.2
2137 Male, age 80, left hemisphere 12.0
1891 Female, age 85, both hemispheres 10.4
2436 Male, age 74, both hemispheres 8.0
Parahippocampal cortex
nTPM: 10.6
1850 Male, age 80, both hemispheres 13.1
2622 Female, age 67, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.4
1990 Female, age 91, right hemisphere 11.3
1933 Female, age 85, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.4
2693 Female, age 94, both hemispheres 10.1
2692 Male, age 74, both hemispheres 9.5
2018 Male, age 76, both hemispheres 9.2
2250 Female, age 67, right hemisphere 8.9
Perirhinal gyrus
nTPM: 12.1
1794 Male, age 80, right hemisphere 13.0
1847 Female, age 91, left hemisphere 13.0
2848 Male, age 76, right hemisphere 12.7
1841 Female, age 85, right hemisphere 11.3
2521 Female, age 94, right hemisphere 10.3
Subiculum
nTPM: 9.5
1901 Male, age 80, both hemispheres 11.0
2438 Female, age 94, left hemisphere 10.7
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 9.8
2729 Female, age 91, right hemisphere 7.9
2042 Male, age 76, both hemispheres 7.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 19.3
Min nTPM: 6.4
Std nTPM: 2.7
Median nTPM: 11.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 19.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 19.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 18.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 18.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 17.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 16.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 16.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 16.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.6
FF:10153-102I9 76 years, female 40.1
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 38.6
Min nTPM: 23.7
Sample A Female 27.5
Sample B Female 24.4
Sample C Male 38.6
Sample D Male 23.7
Entorhinal cortex
nTPM: 48.1
Samples: 4

Max nTPM: 64.2
Min nTPM: 35.2
Sample A Female 35.2
Sample B Female 64.2
Sample C Male 49.3
Sample D Male 43.6
Subiculum
nTPM: 32.8
Samples: 4

Max nTPM: 44.8
Min nTPM: 24.5
Sample A Female 44.8
Sample B Female 34.5
Sample C Male 27.5
Sample D Male 24.5
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 31.4
Min nTPM: 21.8
Sample A Female 22.4
Sample B Female 28.7
Sample C Male 31.4
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 35.9
Min nTPM: 32.3
Sample A Male 35.9
Sample B Male 34.3
Sample C Female 32.3
Sample D Female 33.0
Hippocampal formation
nTPM: 33.5
Samples: 4

Max nTPM: 34.7
Min nTPM: 31.7
Sample A Male 32.8
Sample B Male 34.7
Sample C Female 34.7
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75931461 Antisense, RP_060601_03_D09, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.