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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:20.7 nTPM
FANTOM5:83.4 Scaled Tags Per Million
Pig:43.8 nTPM
Mouse:131.2 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005853
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2621 Female, age 67, right hemisphere 28.2
2148 Female, age 91, left hemisphere 25.3
2529 Female, age 94, left hemisphere 25.3
1898 Male, age 80, left hemisphere 22.0
1911 Female, age 85, right hemisphere 20.7
1855 Male, age 76, left hemisphere 19.9
Dentate gyrus
nTPM: 21.6
2528 Male, age 74, both hemispheres 25.2
2246 Female, age 85, both hemispheres 22.8
2530 Female, age 94, left hemisphere 22.8
2531 Female, age 67, both hemispheres 22.0
1927 Female, age 91, both hemispheres 19.2
2010 Male, age 76, both hemispheres 17.8
Entorhinal gyrus
nTPM: 24.2
2613 Female, age 94, left hemisphere 31.3
2686 Male, age 75, right hemisphere 26.9
1787 Male, age 76, left hemisphere 22.9
2764 Male, age 80, right hemisphere 22.7
1938 Female, age 85, left hemisphere 22.0
2117 Female, age 91, right hemisphere 19.1
Hippocampus, CA1
nTPM: 21.0
1873 Female, age 85, both hemispheres 25.6
2749 Male, age 80, left hemisphere 23.8
2527 Male, age 74, both hemispheres 22.6
2082 Female, age 91, right hemisphere 20.0
2045 Male, age 76, both hemispheres 12.7
Hippocampus, CA2
nTPM: 22.1
1963 Male, age 80, left hemisphere 25.9
2437 Female, age 94, left hemisphere 24.3
1940 Female, age 85, left hemisphere 21.8
2113 Female, age 91, right hemisphere 21.5
2249 Male, age 74, both hemispheres 20.9
1892 Male, age 76, both hemispheres 18.2
Hippocampus, CA3
nTPM: 21.1
2861 Female, age 67, both hemispheres 35.7
2436 Male, age 74, both hemispheres 23.0
2620 Female, age 94, left hemisphere 18.7
1891 Female, age 85, both hemispheres 17.9
2137 Male, age 80, left hemisphere 17.9
1867 Male, age 76, both hemispheres 13.4
Parahippocampal cortex
nTPM: 22.9
2622 Female, age 67, right hemisphere 36.3
2692 Male, age 74, both hemispheres 26.7
2245 Female, age 91, both hemispheres 22.6
2532 Female, age 72, left hemisphere 22.5
1850 Male, age 80, both hemispheres 21.9
2693 Female, age 94, both hemispheres 21.8
1990 Female, age 91, right hemisphere 20.8
1933 Female, age 85, both hemispheres 20.6
2250 Female, age 67, right hemisphere 19.5
2018 Male, age 76, both hemispheres 16.2
Perirhinal gyrus
nTPM: 20.8
2521 Female, age 94, right hemisphere 22.6
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 21.1
1841 Female, age 85, right hemisphere 20.6
2848 Male, age 76, right hemisphere 17.8
Subiculum
nTPM: 20.0
2619 Male, age 74, both hemispheres 29.4
2729 Female, age 91, right hemisphere 23.2
1977 Female, age 85, both hemispheres 18.8
2438 Female, age 94, left hemisphere 16.8
2042 Male, age 76, both hemispheres 16.7
1901 Male, age 80, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.7
Samples: 197

Max nTPM: 36.8
Min nTPM: 12.2
Std nTPM: 3.8
Median nTPM: 20.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 36.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 31.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 30.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 29.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 28.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 27.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 27.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 26.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.4
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 83.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 41.1
Min nTPM: 35.5
Sample A Female 39.1
Sample B Female 37.9
Sample C Male 35.5
Sample D Male 41.1
Entorhinal cortex
nTPM: 43.8
Samples: 4

Max nTPM: 50.4
Min nTPM: 39.3
Sample A Female 50.4
Sample B Female 39.3
Sample C Male 44.9
Sample D Male 40.5
Subiculum
nTPM: 39.7
Samples: 4

Max nTPM: 45.6
Min nTPM: 35.5
Sample A Female 45.6
Sample B Female 36.8
Sample C Male 40.7
Sample D Male 35.5
Ventral hippocampus
nTPM: 38.1
Samples: 4

Max nTPM: 45.4
Min nTPM: 31.1
Sample A Female 31.1
Sample B Female 32.6
Sample C Male 43.4
Sample D Male 45.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.2
Samples: 4

Max nTPM: 156.5
Min nTPM: 119.3
Sample A Male 121.0
Sample B Male 128.1
Sample C Female 119.3
Sample D Female 156.5
Hippocampal formation
nTPM: 107.2
Samples: 4

Max nTPM: 114.3
Min nTPM: 97.9
Sample A Male 114.3
Sample B Male 106.9
Sample C Female 109.5
Sample D Female 97.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68924823 Antisense, RP_050309_01_B01, Mouse strain C57BL/6J (56 days, male) 4.0

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