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GALNT9
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:41.8 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:73.9 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
1898 Male, age 80, left hemisphere 12.8
1855 Male, age 76, left hemisphere 10.5
2148 Female, age 91, left hemisphere 9.3
2621 Female, age 67, right hemisphere 8.5
2529 Female, age 94, left hemisphere 7.7
1911 Female, age 85, right hemisphere 6.1
Dentate gyrus
nTPM: 7.9
2530 Female, age 94, left hemisphere 12.8
1927 Female, age 91, both hemispheres 11.4
2010 Male, age 76, both hemispheres 9.1
2528 Male, age 74, both hemispheres 6.2
2246 Female, age 85, both hemispheres 4.9
2531 Female, age 67, both hemispheres 3.4
Entorhinal gyrus
nTPM: 11.2
2613 Female, age 94, left hemisphere 16.7
2686 Male, age 75, right hemisphere 15.5
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 8.7
1787 Male, age 76, left hemisphere 5.7
2117 Female, age 91, right hemisphere 5.3
Hippocampus, CA1
nTPM: 10.9
2749 Male, age 80, left hemisphere 24.2
2527 Male, age 74, both hemispheres 10.5
2082 Female, age 91, right hemisphere 7.8
1873 Female, age 85, both hemispheres 7.4
2045 Male, age 76, both hemispheres 4.4
Hippocampus, CA2
nTPM: 8.9
1892 Male, age 76, both hemispheres 10.9
1963 Male, age 80, left hemisphere 10.4
2437 Female, age 94, left hemisphere 9.8
2249 Male, age 74, both hemispheres 8.9
2113 Female, age 91, right hemisphere 7.8
1940 Female, age 85, left hemisphere 5.7
Hippocampus, CA3
nTPM: 9.2
2137 Male, age 80, left hemisphere 23.8
2861 Female, age 67, both hemispheres 11.3
1867 Male, age 76, both hemispheres 8.8
2436 Male, age 74, both hemispheres 7.0
1891 Female, age 85, both hemispheres 3.3
2620 Female, age 94, left hemisphere 0.7
Parahippocampal cortex
nTPM: 10.3
2622 Female, age 67, right hemisphere 16.9
2245 Female, age 91, both hemispheres 14.5
2693 Female, age 94, both hemispheres 12.2
1850 Male, age 80, both hemispheres 10.0
2018 Male, age 76, both hemispheres 9.8
2532 Female, age 72, left hemisphere 8.7
1990 Female, age 91, right hemisphere 8.4
1933 Female, age 85, both hemispheres 8.1
2250 Female, age 67, right hemisphere 7.3
2692 Male, age 74, both hemispheres 7.3
Perirhinal gyrus
nTPM: 10.4
1847 Female, age 91, left hemisphere 13.4
2521 Female, age 94, right hemisphere 12.8
1794 Male, age 80, right hemisphere 11.8
2848 Male, age 76, right hemisphere 7.6
1841 Female, age 85, right hemisphere 6.4
Subiculum
nTPM: 7.2
1901 Male, age 80, both hemispheres 12.4
2042 Male, age 76, both hemispheres 6.7
2438 Female, age 94, left hemisphere 6.7
2729 Female, age 91, right hemisphere 6.4
1977 Female, age 85, both hemispheres 6.1
2619 Male, age 74, both hemispheres 4.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.8
Samples: 197

Max nTPM: 148.2
Min nTPM: 0.6
Std nTPM: 28.0
Median nTPM: 38.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 148.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 138.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 125.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 113.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 113.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 111.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 102.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 95.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 95.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 94.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 93.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 43.5
Min nTPM: 21.8
Sample A Female 38.4
Sample B Female 41.8
Sample C Male 43.5
Sample D Male 21.8
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 24.7
Sample A Female 24.7
Sample B Female 35.0
Sample C Male 28.7
Sample D Male 30.3
Subiculum
nTPM: 22.5
Samples: 4

Max nTPM: 35.0
Min nTPM: 15.6
Sample A Female 22.6
Sample B Female 15.6
Sample C Male 35.0
Sample D Male 16.8
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 52.3
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 26.6
Sample C Male 30.0
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.0
Samples: 4

Max nTPM: 71.9
Min nTPM: 54.9
Sample A Male 54.9
Sample B Male 60.2
Sample C Female 71.9
Sample D Female 69.1
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 82.8
Min nTPM: 61.4
Sample A Male 61.4
Sample B Male 76.9
Sample C Female 82.8
Sample D Female 74.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
73817422 Antisense, RP_050927_04_A09, Mouse strain C57BL/6J (56 days, male) 11.4
71656678 Antisense, RP_050927_04_A09, Mouse strain C57BL/6J (56 days, male) 9.1
74431366 Antisense, RP_060207_01_H06, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.