ABOUTMENU
HELP
NEWS
BEGAIN
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:39.6 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:53.1 nTPM
Mouse:44.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
2621 Female, age 67, right hemisphere 29.5
2529 Female, age 94, left hemisphere 22.0
2148 Female, age 91, left hemisphere 19.6
1855 Male, age 76, left hemisphere 18.6
1898 Male, age 80, left hemisphere 17.4
1911 Female, age 85, right hemisphere 16.5
Dentate gyrus
nTPM: 18.8
2531 Female, age 67, both hemispheres 35.0
1927 Female, age 91, both hemispheres 16.9
2010 Male, age 76, both hemispheres 15.6
2528 Male, age 74, both hemispheres 15.4
2246 Female, age 85, both hemispheres 15.2
2530 Female, age 94, left hemisphere 14.7
Entorhinal gyrus
nTPM: 14.5
2686 Male, age 75, right hemisphere 20.4
2764 Male, age 80, right hemisphere 16.3
2613 Female, age 94, left hemisphere 16.0
1787 Male, age 76, left hemisphere 12.3
2117 Female, age 91, right hemisphere 11.3
1938 Female, age 85, left hemisphere 10.7
Hippocampus, CA1
nTPM: 22.0
2527 Male, age 74, both hemispheres 33.0
2749 Male, age 80, left hemisphere 26.8
2045 Male, age 76, both hemispheres 18.2
2082 Female, age 91, right hemisphere 17.4
1873 Female, age 85, both hemispheres 14.7
Hippocampus, CA2
nTPM: 16.0
1963 Male, age 80, left hemisphere 22.1
2113 Female, age 91, right hemisphere 18.7
2437 Female, age 94, left hemisphere 15.6
2249 Male, age 74, both hemispheres 15.3
1892 Male, age 76, both hemispheres 14.7
1940 Female, age 85, left hemisphere 9.5
Hippocampus, CA3
nTPM: 21.6
2861 Female, age 67, both hemispheres 38.0
2137 Male, age 80, left hemisphere 29.1
2620 Female, age 94, left hemisphere 26.0
2436 Male, age 74, both hemispheres 15.3
1867 Male, age 76, both hemispheres 12.6
1891 Female, age 85, both hemispheres 8.5
Parahippocampal cortex
nTPM: 16.6
2245 Female, age 91, both hemispheres 32.6
2250 Female, age 67, right hemisphere 21.2
2622 Female, age 67, right hemisphere 19.9
2018 Male, age 76, both hemispheres 19.6
2693 Female, age 94, both hemispheres 17.5
2532 Female, age 72, left hemisphere 14.3
1933 Female, age 85, both hemispheres 11.1
1990 Female, age 91, right hemisphere 10.5
2692 Male, age 74, both hemispheres 9.7
1850 Male, age 80, both hemispheres 9.6
Perirhinal gyrus
nTPM: 16.5
2521 Female, age 94, right hemisphere 19.9
1847 Female, age 91, left hemisphere 19.2
1794 Male, age 80, right hemisphere 18.0
1841 Female, age 85, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 11.7
2619 Male, age 74, both hemispheres 14.6
2729 Female, age 91, right hemisphere 14.2
1901 Male, age 80, both hemispheres 12.6
1977 Female, age 85, both hemispheres 12.4
2438 Female, age 94, left hemisphere 8.4
2042 Male, age 76, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.6
Samples: 197

Max nTPM: 166.2
Min nTPM: 4.5
Std nTPM: 21.8
Median nTPM: 38.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 166.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 93.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 87.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 87.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 86.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 85.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 84.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 81.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 79.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10153-102I9 76 years, female 8.7
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 60.5
Min nTPM: 32.9
Sample A Female 60.5
Sample B Female 50.8
Sample C Male 46.0
Sample D Male 32.9
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 63.5
Min nTPM: 43.6
Sample A Female 48.9
Sample B Female 44.3
Sample C Male 63.5
Sample D Male 43.6
Subiculum
nTPM: 50.4
Samples: 4

Max nTPM: 71.4
Min nTPM: 32.8
Sample A Female 71.4
Sample B Female 45.3
Sample C Male 52.0
Sample D Male 32.8
Ventral hippocampus
nTPM: 53.1
Samples: 4

Max nTPM: 67.5
Min nTPM: 41.3
Sample A Female 44.1
Sample B Female 41.3
Sample C Male 67.5
Sample D Male 59.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 48.2
Min nTPM: 42.3
Sample A Male 44.5
Sample B Male 48.2
Sample C Female 42.3
Sample D Female 44.0
Hippocampal formation
nTPM: 38.7
Samples: 4

Max nTPM: 43.0
Min nTPM: 34.3
Sample A Male 43.0
Sample B Male 37.3
Sample C Female 34.3
Sample D Female 40.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.