ABOUTMENU
HELP
NEWS
ZNF530
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:4.2 nTPM
HPA:4.2 nTPM
GTEx:2.8 nTPM
FANTOM5:5.4 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi
Antibody HPA045868
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 4.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3.5
1854 Male, age 80, left hemisphere 4.2
2288 Male, age 75, left hemisphere 4.0
2846 Female, age 79, unknown 3.6
2289 Male, age 61, right hemisphere 3.5
1781 Male, age 74, unknown 3.1
1857 Female, age 85, left hemisphere 3.1
2290 Female, age 72, unknown 3.1
2481 Female, age 94, left hemisphere 3.1
Claustrum
nTPM: 4.2
2645 Female, age 72, unknown 5.8
2392 Female, age 94, both hemispheres 4.3
2284 Female, age 91, both hemispheres 4.2
2292 Female, age 85, both hemispheres 4.1
2196 Female, age 79, unknown 4.0
2491 Male, age 75, both hemispheres 3.9
2568 Male, age 61, both hemispheres 3.9
1956 Male, age 74, unknown 3.7
2198 Male, age 80, both hemispheres 3.7
Globus pallidus, externus
nTPM: 3.8
2567 Female, age 72, unknown 4.8
2395 Male, age 75, both hemispheres 4.0
1996 Male, age 80, right hemisphere 3.4
2646 Male, age 61, right hemisphere 3.3
2772 Female, age 79, unknown 3.2
Globus pallidus, internus
nTPM: 4.1
2037 Male, age 80, right hemisphere 4.9
1818 Male, age 74, unknown 4.7
2111 Female, age 85, right hemisphere 4.4
2287 Male, age 75, right hemisphere 3.9
2778 Female, age 91, both hemispheres 3.8
2566 Female, age 72, unknown 3.7
2483 Female, age 94, right hemisphere 3.5
Nucleus accumbens
nTPM: 3.6
1856 Female, age 91, right hemisphere 4.3
2732 Male, age 80, right hemisphere 4.1
2824 Male, age 61, right hemisphere 3.9
2698 Female, age 72, unknown 3.5
2286 Male, age 75, left hemisphere 3.4
1783 Male, age 74, unknown 3.2
1806 Female, age 85, left hemisphere 3.2
2391 Female, age 94, left hemisphere 3.1
Nucleus basalis of Meynert
nTPM: 3.9
2393 Male, age 80, right hemisphere 4.2
2484 Female, age 94, left hemisphere 4.0
2569 Male, age 61, both hemispheres 4.0
2821 Male, age 75, both hemispheres 3.6
Nucleus of the diagonal band
nTPM: 3.8
2029 Male, age 61, right hemisphere 4.2
2775 Male, age 80, right hemisphere 4.1
1979 Male, age 74, unknown 3.9
1812 Female, age 91, both hemispheres 3.7
2195 Female, age 85, both hemispheres 3.3
Olfactory tubercle
nTPM: 3.9
1998 Female, age 91, both hemispheres 4.6
2856 Male, age 75, right hemisphere 4.3
1846 Male, age 80, right hemisphere 3.6
2487 Female, age 94, left hemisphere 3.2
Putamen
nTPM: 4.1
1937 Female, age 91, right hemisphere 5.6
2489 Female, age 72, unknown 4.6
2466 Female, age 79, unknown 4.3
1829 Male, age 74, unknown 4.0
2647 Male, age 75, left hemisphere 3.7
1838 Male, age 80, right hemisphere 3.3
2482 Female, age 94, left hemisphere 3.3
Septal nuclei
nTPM: 3.8
2009 Female, age 91, both hemispheres 4.4
2059 Female, age 85, both hemispheres 4.2
2031 Female, age 72, unknown 4.0
2394 Male, age 61, left hemisphere 4.0
2199 Male, age 80, right hemisphere 3.6
2629 Female, age 94, right hemisphere 3.4
1960 Male, age 74, unknown 3.3

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.3
Samples: 246

Max nTPM: 9.5
Min nTPM: 0.1
Std nTPM: 1.4
Median nTPM: 2.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 9.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 7.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 6.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 6.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 5.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 5.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.5
Samples: 246

Max nTPM: 8.3
Min nTPM: 0.1
Std nTPM: 1.3
Median nTPM: 2.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 8.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 7.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 7.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 5.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 5.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 5.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 5.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 5.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 2.8
Samples: 205

Max nTPM: 7.4
Min nTPM: 0.3
Std nTPM: 1.4
Median nTPM: 2.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 6.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 5.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 5.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 5.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 5.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 3.7
FF:10164-103B2 76 years, female 3.7
Globus pallidus
Scaled Tags Per Million: 3.8
FF:10175-103C4 60 years, female 3.9
FF:10161-103A8 76 years, female 3.7
Nucleus accumbens
Scaled Tags Per Million: 3.2
FF:10037-101F1 23-56 years, mixed 3.2
Putamen
Scaled Tags Per Million: 5.4
FF:10176-103C5 60 years, female 5.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.