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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:93.1 nTPM
HPA:93.1 nTPM
GTEx:113.8 nTPM
FANTOM5:116.8 Scaled Tags Per Million
Pig:123.4 nTPM
Mouse:44.7 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044133
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.1
Sample id Sample description nTPM
Hippocampus
nTPM: 79.5
2621 Female, age 67, right hemisphere 95.1
2529 Female, age 94, left hemisphere 90.4
1898 Male, age 80, left hemisphere 75.5
2148 Female, age 91, left hemisphere 73.5
1855 Male, age 76, left hemisphere 71.8
1911 Female, age 85, right hemisphere 70.5
Dentate gyrus
nTPM: 78.3
2531 Female, age 67, both hemispheres 104.3
1927 Female, age 91, both hemispheres 81.9
2246 Female, age 85, both hemispheres 79.7
2010 Male, age 76, both hemispheres 70.6
2530 Female, age 94, left hemisphere 70.1
2528 Male, age 74, both hemispheres 62.9
Entorhinal gyrus
nTPM: 85.9
2686 Male, age 75, right hemisphere 103.6
2764 Male, age 80, right hemisphere 93.8
2613 Female, age 94, left hemisphere 88.1
1938 Female, age 85, left hemisphere 85.7
1787 Male, age 76, left hemisphere 79.0
2117 Female, age 91, right hemisphere 65.3
Hippocampus, CA1
nTPM: 85.1
2749 Male, age 80, left hemisphere 106.3
2045 Male, age 76, both hemispheres 86.5
2527 Male, age 74, both hemispheres 83.1
1873 Female, age 85, both hemispheres 76.0
2082 Female, age 91, right hemisphere 73.7
Hippocampus, CA2
nTPM: 72.3
1892 Male, age 76, both hemispheres 86.2
2113 Female, age 91, right hemisphere 73.3
2437 Female, age 94, left hemisphere 71.7
1963 Male, age 80, left hemisphere 71.2
1940 Female, age 85, left hemisphere 69.6
2249 Male, age 74, both hemispheres 62.2
Hippocampus, CA3
nTPM: 91.0
2620 Female, age 94, left hemisphere 114.5
2137 Male, age 80, left hemisphere 112.8
2861 Female, age 67, both hemispheres 107.3
1867 Male, age 76, both hemispheres 80.8
1891 Female, age 85, both hemispheres 68.3
2436 Male, age 74, both hemispheres 62.7
Parahippocampal cortex
nTPM: 86.9
2622 Female, age 67, right hemisphere 117.5
2245 Female, age 91, both hemispheres 95.8
1850 Male, age 80, both hemispheres 93.7
2532 Female, age 72, left hemisphere 88.5
2693 Female, age 94, both hemispheres 86.5
1933 Female, age 85, both hemispheres 84.0
2692 Male, age 74, both hemispheres 79.9
1990 Female, age 91, right hemisphere 76.6
2018 Male, age 76, both hemispheres 74.3
2250 Female, age 67, right hemisphere 72.3
Perirhinal gyrus
nTPM: 93.1
1794 Male, age 80, right hemisphere 109.0
1841 Female, age 85, right hemisphere 99.4
2848 Male, age 76, right hemisphere 96.2
1847 Female, age 91, left hemisphere 90.5
2521 Female, age 94, right hemisphere 70.2
Subiculum
nTPM: 77.6
2438 Female, age 94, left hemisphere 88.8
1977 Female, age 85, both hemispheres 83.6
1901 Male, age 80, both hemispheres 81.4
2619 Male, age 74, both hemispheres 78.1
2042 Male, age 76, both hemispheres 72.8
2729 Female, age 91, right hemisphere 61.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 113.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.8
Samples: 197

Max nTPM: 269.2
Min nTPM: 26.4
Std nTPM: 46.0
Median nTPM: 110.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 269.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 258.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 220.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 204.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 200.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 199.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 198.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 195.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 191.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 186.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 184.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.8
FF:10169-103B7 60 years, female 139.1
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.1
Samples: 4

Max nTPM: 127.5
Min nTPM: 76.3
Sample A Female 127.5
Sample B Female 117.1
Sample C Male 83.4
Sample D Male 76.3
Entorhinal cortex
nTPM: 89.2
Samples: 4

Max nTPM: 101.4
Min nTPM: 78.2
Sample A Female 101.4
Sample B Female 78.2
Sample C Male 87.8
Sample D Male 89.2
Subiculum
nTPM: 110.3
Samples: 4

Max nTPM: 138.8
Min nTPM: 87.2
Sample A Female 138.8
Sample B Female 99.4
Sample C Male 115.7
Sample D Male 87.2
Ventral hippocampus
nTPM: 123.4
Samples: 4

Max nTPM: 154.5
Min nTPM: 86.3
Sample A Female 125.7
Sample B Female 86.3
Sample C Male 154.5
Sample D Male 127.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 47.1
Min nTPM: 43.3
Sample A Male 44.3
Sample B Male 43.3
Sample C Female 47.1
Sample D Female 44.3
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 48.3
Min nTPM: 40.7
Sample A Male 48.3
Sample B Male 43.6
Sample C Female 40.7
Sample D Female 44.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
73817931 Antisense, RP_051214_01_A02, Mouse strain C57BL/6J (56 days, male) 14.5
385781 Antisense, RP_040625_01_E09, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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