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SEPTIN9
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:68.1 nTPM
HPA:68.1 nTPM
GTEx:53.5 nTPM
FANTOM5:97.6 Scaled Tags Per Million
Pig:67.3 nTPM
Mouse:57.5 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042564
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.1
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2529 Female, age 94, left hemisphere 74.7
1898 Male, age 80, left hemisphere 60.4
1855 Male, age 76, left hemisphere 51.1
2621 Female, age 67, right hemisphere 50.2
2148 Female, age 91, left hemisphere 47.7
1911 Female, age 85, right hemisphere 45.5
Dentate gyrus
nTPM: 49.3
2010 Male, age 76, both hemispheres 56.8
2530 Female, age 94, left hemisphere 53.9
2528 Male, age 74, both hemispheres 50.1
2246 Female, age 85, both hemispheres 49.2
2531 Female, age 67, both hemispheres 45.1
1927 Female, age 91, both hemispheres 40.7
Entorhinal gyrus
nTPM: 68.1
2686 Male, age 75, right hemisphere 87.9
1938 Female, age 85, left hemisphere 73.2
2764 Male, age 80, right hemisphere 69.1
2117 Female, age 91, right hemisphere 69.0
1787 Male, age 76, left hemisphere 56.0
2613 Female, age 94, left hemisphere 53.5
Hippocampus, CA1
nTPM: 48.2
2527 Male, age 74, both hemispheres 51.7
2045 Male, age 76, both hemispheres 50.6
1873 Female, age 85, both hemispheres 47.9
2082 Female, age 91, right hemisphere 46.5
2749 Male, age 80, left hemisphere 44.1
Hippocampus, CA2
nTPM: 52.3
2437 Female, age 94, left hemisphere 63.7
2249 Male, age 74, both hemispheres 52.7
1940 Female, age 85, left hemisphere 52.4
2113 Female, age 91, right hemisphere 51.5
1963 Male, age 80, left hemisphere 49.3
1892 Male, age 76, both hemispheres 44.2
Hippocampus, CA3
nTPM: 50.6
2861 Female, age 67, both hemispheres 57.1
2436 Male, age 74, both hemispheres 56.1
1891 Female, age 85, both hemispheres 50.9
1867 Male, age 76, both hemispheres 50.2
2620 Female, age 94, left hemisphere 49.9
2137 Male, age 80, left hemisphere 39.5
Parahippocampal cortex
nTPM: 62.1
2622 Female, age 67, right hemisphere 69.3
1933 Female, age 85, both hemispheres 68.4
2532 Female, age 72, left hemisphere 65.9
2692 Male, age 74, both hemispheres 63.5
2250 Female, age 67, right hemisphere 62.7
2693 Female, age 94, both hemispheres 62.0
2018 Male, age 76, both hemispheres 59.3
1850 Male, age 80, both hemispheres 59.1
2245 Female, age 91, both hemispheres 58.2
1990 Female, age 91, right hemisphere 52.9
Perirhinal gyrus
nTPM: 60.5
1794 Male, age 80, right hemisphere 65.3
1847 Female, age 91, left hemisphere 63.8
1841 Female, age 85, right hemisphere 63.4
2848 Male, age 76, right hemisphere 56.3
2521 Female, age 94, right hemisphere 53.5
Subiculum
nTPM: 56.3
2438 Female, age 94, left hemisphere 62.7
2619 Male, age 74, both hemispheres 62.2
1977 Female, age 85, both hemispheres 58.9
2042 Male, age 76, both hemispheres 53.0
1901 Male, age 80, both hemispheres 50.6
2729 Female, age 91, right hemisphere 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.5
Samples: 197

Max nTPM: 137.2
Min nTPM: 24.4
Std nTPM: 15.4
Median nTPM: 51.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 137.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 100.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 97.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 97.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 96.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 93.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 88.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 82.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 79.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 79.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.6
FF:10153-102I9 76 years, female 102.0
FF:10169-103B7 60 years, female 93.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 91.8
Min nTPM: 42.7
Sample A Female 91.8
Sample B Female 58.8
Sample C Male 64.1
Sample D Male 42.7
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 54.3
Min nTPM: 38.9
Sample A Female 54.3
Sample B Female 39.1
Sample C Male 51.7
Sample D Male 38.9
Subiculum
nTPM: 54.3
Samples: 4

Max nTPM: 78.5
Min nTPM: 44.3
Sample A Female 78.5
Sample B Female 44.3
Sample C Male 47.2
Sample D Male 47.1
Ventral hippocampus
nTPM: 67.3
Samples: 4

Max nTPM: 84.4
Min nTPM: 39.2
Sample A Female 68.3
Sample B Female 39.2
Sample C Male 77.3
Sample D Male 84.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 54.9
Min nTPM: 39.2
Sample A Male 42.4
Sample B Male 39.2
Sample C Female 49.9
Sample D Female 54.9
Hippocampal formation
nTPM: 57.5
Samples: 4

Max nTPM: 63.5
Min nTPM: 53.1
Sample A Male 53.1
Sample B Male 57.9
Sample C Female 63.5
Sample D Female 55.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
69262288 Antisense, RP_050303_01_F05, Mouse strain C57BL/6J (56 days, male) 14.7

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The Human Protein Atlas

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