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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:57.9 nTPM
HPA:57.9 nTPM
GTEx:47.8 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:119.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003187
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.1
1898 Male, age 80, left hemisphere 59.9
2148 Female, age 91, left hemisphere 56.9
2621 Female, age 67, right hemisphere 56.1
2529 Female, age 94, left hemisphere 55.7
1855 Male, age 76, left hemisphere 54.1
1911 Female, age 85, right hemisphere 53.7
Dentate gyrus
nTPM: 55.4
1927 Female, age 91, both hemispheres 57.9
2246 Female, age 85, both hemispheres 56.2
2010 Male, age 76, both hemispheres 55.5
2528 Male, age 74, both hemispheres 54.9
2530 Female, age 94, left hemisphere 54.0
2531 Female, age 67, both hemispheres 53.6
Entorhinal gyrus
nTPM: 54.6
1938 Female, age 85, left hemisphere 57.9
2764 Male, age 80, right hemisphere 55.9
1787 Male, age 76, left hemisphere 55.3
2686 Male, age 75, right hemisphere 54.3
2117 Female, age 91, right hemisphere 52.0
2613 Female, age 94, left hemisphere 52.0
Hippocampus, CA1
nTPM: 57.9
2749 Male, age 80, left hemisphere 63.9
2045 Male, age 76, both hemispheres 58.2
2527 Male, age 74, both hemispheres 56.9
1873 Female, age 85, both hemispheres 56.6
2082 Female, age 91, right hemisphere 53.9
Hippocampus, CA2
nTPM: 56.7
1892 Male, age 76, both hemispheres 62.7
2249 Male, age 74, both hemispheres 58.7
1963 Male, age 80, left hemisphere 57.0
1940 Female, age 85, left hemisphere 54.5
2113 Female, age 91, right hemisphere 54.4
2437 Female, age 94, left hemisphere 53.0
Hippocampus, CA3
nTPM: 57.3
2137 Male, age 80, left hemisphere 59.3
2436 Male, age 74, both hemispheres 59.0
1867 Male, age 76, both hemispheres 58.8
1891 Female, age 85, both hemispheres 56.5
2620 Female, age 94, left hemisphere 56.2
2861 Female, age 67, both hemispheres 53.9
Parahippocampal cortex
nTPM: 55.6
1850 Male, age 80, both hemispheres 59.8
2693 Female, age 94, both hemispheres 56.9
2250 Female, age 67, right hemisphere 56.7
1990 Female, age 91, right hemisphere 56.5
1933 Female, age 85, both hemispheres 55.4
2692 Male, age 74, both hemispheres 54.9
2245 Female, age 91, both hemispheres 54.2
2018 Male, age 76, both hemispheres 54.1
2532 Female, age 72, left hemisphere 54.0
2622 Female, age 67, right hemisphere 53.4
Perirhinal gyrus
nTPM: 57.1
1847 Female, age 91, left hemisphere 60.2
1841 Female, age 85, right hemisphere 58.3
1794 Male, age 80, right hemisphere 56.8
2521 Female, age 94, right hemisphere 55.0
2848 Male, age 76, right hemisphere 54.9
Subiculum
nTPM: 55.1
1901 Male, age 80, both hemispheres 57.7
1977 Female, age 85, both hemispheres 57.4
2619 Male, age 74, both hemispheres 55.0
2729 Female, age 91, right hemisphere 54.8
2042 Male, age 76, both hemispheres 53.4
2438 Female, age 94, left hemisphere 52.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.8
Samples: 197

Max nTPM: 118.0
Min nTPM: 13.4
Std nTPM: 17.3
Median nTPM: 46.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 89.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 88.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 88.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 84.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 84.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 83.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 83.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 81.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 80.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 79.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.2
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 20.4
Min nTPM: 12.1
Sample A Female 20.4
Sample B Female 16.0
Sample C Male 16.1
Sample D Male 12.1
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.1
Sample A Female 15.7
Sample B Female 17.7
Sample C Male 14.7
Sample D Male 14.1
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.4
Sample A Female 17.4
Sample B Female 14.7
Sample C Male 12.4
Sample D Male 13.3
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.6
Sample A Female 18.5
Sample B Female 13.6
Sample C Male 15.9
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 113.9
Min nTPM: 93.7
Sample A Male 93.7
Sample B Male 113.9
Sample C Female 104.1
Sample D Female 100.0
Hippocampal formation
nTPM: 119.1
Samples: 4

Max nTPM: 134.2
Min nTPM: 104.6
Sample A Male 134.2
Sample B Male 104.6
Sample C Female 114.6
Sample D Female 123.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71488353 Antisense, RP_050913_01_D11, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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