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RAB11B
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:91.7 nTPM
HPA:91.7 nTPM
GTEx:135.3 nTPM
FANTOM5:154.4 Scaled Tags Per Million
Mouse:150.0 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.7
Sample id Sample description nTPM
Hippocampus
nTPM: 84.1
2621 Female, age 67, right hemisphere 91.8
2529 Female, age 94, left hemisphere 88.9
1911 Female, age 85, right hemisphere 83.6
2148 Female, age 91, left hemisphere 83.4
1898 Male, age 80, left hemisphere 78.8
1855 Male, age 76, left hemisphere 78.2
Dentate gyrus
nTPM: 85.6
2530 Female, age 94, left hemisphere 112.2
2528 Male, age 74, both hemispheres 88.7
2246 Female, age 85, both hemispheres 83.0
2010 Male, age 76, both hemispheres 80.7
2531 Female, age 67, both hemispheres 78.5
1927 Female, age 91, both hemispheres 70.4
Entorhinal gyrus
nTPM: 91.7
2613 Female, age 94, left hemisphere 99.9
2117 Female, age 91, right hemisphere 96.9
2764 Male, age 80, right hemisphere 94.7
2686 Male, age 75, right hemisphere 91.2
1787 Male, age 76, left hemisphere 86.9
1938 Female, age 85, left hemisphere 80.4
Hippocampus, CA1
nTPM: 80.3
2749 Male, age 80, left hemisphere 87.2
2527 Male, age 74, both hemispheres 85.9
2082 Female, age 91, right hemisphere 81.8
1873 Female, age 85, both hemispheres 79.1
2045 Male, age 76, both hemispheres 67.4
Hippocampus, CA2
nTPM: 82.4
2437 Female, age 94, left hemisphere 94.7
2249 Male, age 74, both hemispheres 89.4
2113 Female, age 91, right hemisphere 79.9
1940 Female, age 85, left hemisphere 79.4
1892 Male, age 76, both hemispheres 76.0
1963 Male, age 80, left hemisphere 75.1
Hippocampus, CA3
nTPM: 81.2
2620 Female, age 94, left hemisphere 89.4
2861 Female, age 67, both hemispheres 85.6
1891 Female, age 85, both hemispheres 79.6
2137 Male, age 80, left hemisphere 78.7
2436 Male, age 74, both hemispheres 77.4
1867 Male, age 76, both hemispheres 76.8
Parahippocampal cortex
nTPM: 85.9
2692 Male, age 74, both hemispheres 103.5
2532 Female, age 72, left hemisphere 94.6
2622 Female, age 67, right hemisphere 91.5
2245 Female, age 91, both hemispheres 91.3
1990 Female, age 91, right hemisphere 84.1
2693 Female, age 94, both hemispheres 81.6
1850 Male, age 80, both hemispheres 79.4
2250 Female, age 67, right hemisphere 79.2
1933 Female, age 85, both hemispheres 77.7
2018 Male, age 76, both hemispheres 75.8
Perirhinal gyrus
nTPM: 77.9
1794 Male, age 80, right hemisphere 83.2
2521 Female, age 94, right hemisphere 79.7
2848 Male, age 76, right hemisphere 76.8
1847 Female, age 91, left hemisphere 76.3
1841 Female, age 85, right hemisphere 73.8
Subiculum
nTPM: 90.7
2619 Male, age 74, both hemispheres 102.0
2438 Female, age 94, left hemisphere 98.5
1901 Male, age 80, both hemispheres 90.3
2042 Male, age 76, both hemispheres 88.2
1977 Female, age 85, both hemispheres 87.7
2729 Female, age 91, right hemisphere 77.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.3
Samples: 197

Max nTPM: 224.7
Min nTPM: 68.0
Std nTPM: 24.1
Median nTPM: 132.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 224.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 199.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 198.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 178.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 178.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 176.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 176.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 175.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 174.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 172.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 172.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.4
FF:10153-102I9 76 years, female 178.1
FF:10169-103B7 60 years, female 130.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.0
Samples: 4

Max nTPM: 161.0
Min nTPM: 137.8
Sample A Male 158.4
Sample B Male 142.9
Sample C Female 137.8
Sample D Female 161.0
Hippocampal formation
nTPM: 140.6
Samples: 4

Max nTPM: 143.6
Min nTPM: 135.4
Sample A Male 135.4
Sample B Male 140.8
Sample C Female 143.6
Sample D Female 142.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
69816739 Antisense, RP_050510_01_G07, Mouse strain C57BL/6J (56 days, male) 26.8
69448990 Antisense, RP_050419_03_A09, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.