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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:14.0 nTPM
FANTOM5:2.8 Scaled Tags Per Million
Pig:1.5 nTPM
Mouse:5.0 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061028
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
2529 Female, age 94, left hemisphere 15.1
2621 Female, age 67, right hemisphere 13.2
2148 Female, age 91, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.6
1911 Female, age 85, right hemisphere 11.5
1855 Male, age 76, left hemisphere 10.4
Dentate gyrus
nTPM: 12.9
2531 Female, age 67, both hemispheres 15.7
2530 Female, age 94, left hemisphere 15.2
2528 Male, age 74, both hemispheres 13.1
1927 Female, age 91, both hemispheres 11.6
2246 Female, age 85, both hemispheres 11.0
2010 Male, age 76, both hemispheres 10.7
Entorhinal gyrus
nTPM: 13.6
2764 Male, age 80, right hemisphere 15.0
2686 Male, age 75, right hemisphere 14.9
2613 Female, age 94, left hemisphere 14.1
2117 Female, age 91, right hemisphere 13.7
1787 Male, age 76, left hemisphere 12.1
1938 Female, age 85, left hemisphere 11.9
Hippocampus, CA1
nTPM: 10.6
2527 Male, age 74, both hemispheres 12.4
2749 Male, age 80, left hemisphere 10.6
2082 Female, age 91, right hemisphere 10.3
1873 Female, age 85, both hemispheres 10.0
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 12.0
1963 Male, age 80, left hemisphere 15.5
2437 Female, age 94, left hemisphere 12.3
1940 Female, age 85, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.3
1892 Male, age 76, both hemispheres 10.6
2249 Male, age 74, both hemispheres 10.5
Hippocampus, CA3
nTPM: 11.3
2861 Female, age 67, both hemispheres 15.3
2620 Female, age 94, left hemisphere 12.8
1891 Female, age 85, both hemispheres 11.0
2137 Male, age 80, left hemisphere 10.0
1867 Male, age 76, both hemispheres 9.9
2436 Male, age 74, both hemispheres 8.8
Parahippocampal cortex
nTPM: 11.9
2622 Female, age 67, right hemisphere 14.3
2245 Female, age 91, both hemispheres 13.2
2532 Female, age 72, left hemisphere 12.8
1990 Female, age 91, right hemisphere 12.6
2692 Male, age 74, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.6
2018 Male, age 76, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.2
1850 Male, age 80, both hemispheres 10.5
2693 Female, age 94, both hemispheres 9.8
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 12.6
2521 Female, age 94, right hemisphere 11.3
1847 Female, age 91, left hemisphere 11.2
2848 Male, age 76, right hemisphere 11.2
1841 Female, age 85, right hemisphere 10.5
Subiculum
nTPM: 11.4
1977 Female, age 85, both hemispheres 13.1
2729 Female, age 91, right hemisphere 11.8
2619 Male, age 74, both hemispheres 11.6
2438 Female, age 94, left hemisphere 11.0
2042 Male, age 76, both hemispheres 10.6
1901 Male, age 80, both hemispheres 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 31.7
Min nTPM: 4.9
Std nTPM: 5.0
Median nTPM: 12.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 31.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 30.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 30.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 28.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 28.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 27.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 27.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 25.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 24.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.8
FF:10153-102I9 76 years, female 3.5
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.4
Sample C Male 1.4
Sample D Male 1.8
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.3
Sample A Female 1.4
Sample B Female 1.5
Sample C Male 1.3
Sample D Male 1.7
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.5
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 1.5
Sample C Male 1.5
Sample D Male 1.5
Ventral hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.7
Sample C Male 1.4
Sample D Male 1.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.3
Sample A Male 5.2
Sample B Male 4.3
Sample C Female 4.9
Sample D Female 5.8
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 4.9
Sample C Female 5.1
Sample D Female 4.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
71380526 Antisense, RP_050414_04_F11, Mouse strain C57BL/6J (56 days, male) 13.1

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The Human Protein Atlas

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