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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:15.2 nTPM
FANTOM5:99.2 Scaled Tags Per Million
Pig:75.5 nTPM
Mouse:50.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003505Antibody HPA003881Antibody CAB018768
Glial cells MediumNot detectedNot detected
Neuronal cells HighLowNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.7
2529 Female, age 94, left hemisphere 14.5
2148 Female, age 91, left hemisphere 13.9
1911 Female, age 85, right hemisphere 11.5
1898 Male, age 80, left hemisphere 9.6
1855 Male, age 76, left hemisphere 8.1
2621 Female, age 67, right hemisphere 6.8
Dentate gyrus
nTPM: 9.9
1927 Female, age 91, both hemispheres 13.7
2528 Male, age 74, both hemispheres 13.3
2246 Female, age 85, both hemispheres 12.3
2531 Female, age 67, both hemispheres 10.5
2530 Female, age 94, left hemisphere 5.9
2010 Male, age 76, both hemispheres 3.6
Entorhinal gyrus
nTPM: 14.3
1938 Female, age 85, left hemisphere 17.3
2613 Female, age 94, left hemisphere 17.1
2117 Female, age 91, right hemisphere 13.8
2764 Male, age 80, right hemisphere 13.8
2686 Male, age 75, right hemisphere 12.3
1787 Male, age 76, left hemisphere 11.5
Hippocampus, CA1
nTPM: 12.2
2527 Male, age 74, both hemispheres 15.9
2082 Female, age 91, right hemisphere 13.5
2749 Male, age 80, left hemisphere 11.8
1873 Female, age 85, both hemispheres 10.5
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 10.2
2249 Male, age 74, both hemispheres 12.9
2113 Female, age 91, right hemisphere 12.4
1940 Female, age 85, left hemisphere 11.8
1892 Male, age 76, both hemispheres 9.4
2437 Female, age 94, left hemisphere 8.7
1963 Male, age 80, left hemisphere 6.2
Hippocampus, CA3
nTPM: 12.4
2137 Male, age 80, left hemisphere 18.2
2620 Female, age 94, left hemisphere 15.6
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 10.1
1867 Male, age 76, both hemispheres 9.1
2861 Female, age 67, both hemispheres 9.1
Parahippocampal cortex
nTPM: 11.3
1850 Male, age 80, both hemispheres 16.6
1990 Female, age 91, right hemisphere 13.7
2693 Female, age 94, both hemispheres 13.3
2692 Male, age 74, both hemispheres 12.5
2250 Female, age 67, right hemisphere 11.1
2245 Female, age 91, both hemispheres 10.7
1933 Female, age 85, both hemispheres 10.3
2532 Female, age 72, left hemisphere 10.0
2622 Female, age 67, right hemisphere 8.9
2018 Male, age 76, both hemispheres 5.6
Perirhinal gyrus
nTPM: 15.3
1841 Female, age 85, right hemisphere 18.4
2848 Male, age 76, right hemisphere 16.8
1794 Male, age 80, right hemisphere 16.0
1847 Female, age 91, left hemisphere 15.9
2521 Female, age 94, right hemisphere 9.3
Subiculum
nTPM: 12.7
2438 Female, age 94, left hemisphere 15.3
1977 Female, age 85, both hemispheres 15.1
2729 Female, age 91, right hemisphere 14.4
2619 Male, age 74, both hemispheres 13.2
1901 Male, age 80, both hemispheres 12.0
2042 Male, age 76, both hemispheres 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 25.6
Min nTPM: 5.4
Std nTPM: 3.5
Median nTPM: 15.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 25.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 24.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 23.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 23.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 23.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 22.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 21.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 21.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.2
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 97.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 63.9
Samples: 4

Max nTPM: 70.6
Min nTPM: 56.2
Sample A Female 56.2
Sample B Female 64.9
Sample C Male 70.6
Sample D Male 64.0
Entorhinal cortex
nTPM: 62.2
Samples: 4

Max nTPM: 64.8
Min nTPM: 58.2
Sample A Female 64.5
Sample B Female 58.2
Sample C Male 64.8
Sample D Male 61.2
Subiculum
nTPM: 75.6
Samples: 4

Max nTPM: 83.7
Min nTPM: 70.2
Sample A Female 83.7
Sample B Female 71.0
Sample C Male 77.3
Sample D Male 70.2
Ventral hippocampus
nTPM: 62.1
Samples: 4

Max nTPM: 72.9
Min nTPM: 56.4
Sample A Female 56.5
Sample B Female 62.5
Sample C Male 72.9
Sample D Male 56.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.7
Samples: 4

Max nTPM: 60.0
Min nTPM: 47.2
Sample A Male 48.1
Sample B Male 47.2
Sample C Female 47.3
Sample D Female 60.0
Hippocampal formation
nTPM: 37.2
Samples: 4

Max nTPM: 38.5
Min nTPM: 35.7
Sample A Male 38.5
Sample B Male 38.1
Sample C Female 36.6
Sample D Female 35.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763546 Antisense, RP_050921_02_B10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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