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ZNF490
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:1.9 nTPM
HPA:1.9 nTPM
GTEx:0.5 nTPM
FANTOM5:28.7 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi
Antibody HPA005576
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 1.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1.6
2290 Female, age 72, unknown 2.4
1857 Female, age 85, left hemisphere 2.2
1854 Male, age 80, left hemisphere 2.1
2289 Male, age 61, right hemisphere 1.7
2288 Male, age 75, left hemisphere 1.5
2846 Female, age 79, unknown 1.4
1781 Male, age 74, unknown 1.1
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 1.6
2284 Female, age 91, both hemispheres 2.6
2568 Male, age 61, both hemispheres 2.2
2491 Male, age 75, both hemispheres 2.1
2645 Female, age 72, unknown 2.0
2392 Female, age 94, both hemispheres 1.8
2292 Female, age 85, both hemispheres 1.1
1956 Male, age 74, unknown 1.0
2198 Male, age 80, both hemispheres 0.9
2196 Female, age 79, unknown 0.4
Globus pallidus, externus
nTPM: 0.5
2567 Female, age 72, unknown 1.5
2646 Male, age 61, right hemisphere 0.6
2395 Male, age 75, both hemispheres 0.5
1996 Male, age 80, right hemisphere 0.1
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.6
2111 Female, age 85, right hemisphere 1.9
2566 Female, age 72, unknown 1.1
1818 Male, age 74, unknown 0.8
2778 Female, age 91, both hemispheres 0.6
2037 Male, age 80, right hemisphere 0.3
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
Nucleus accumbens
nTPM: 1.7
2824 Male, age 61, right hemisphere 4.2
1783 Male, age 74, unknown 2.4
1806 Female, age 85, left hemisphere 1.9
1856 Female, age 91, right hemisphere 1.6
2286 Male, age 75, left hemisphere 1.4
2732 Male, age 80, right hemisphere 1.3
2698 Female, age 72, unknown 0.6
2391 Female, age 94, left hemisphere 0.3
Nucleus basalis of Meynert
nTPM: 0.8
2393 Male, age 80, right hemisphere 2.1
2484 Female, age 94, left hemisphere 0.4
2569 Male, age 61, both hemispheres 0.4
2821 Male, age 75, both hemispheres 0.2
Nucleus of the diagonal band
nTPM: 1.5
2029 Male, age 61, right hemisphere 3.6
2195 Female, age 85, both hemispheres 1.2
2775 Male, age 80, right hemisphere 1.2
1979 Male, age 74, unknown 1.1
1812 Female, age 91, both hemispheres 0.6
Olfactory tubercle
nTPM: 1.9
2487 Female, age 94, left hemisphere 3.1
1998 Female, age 91, both hemispheres 1.9
2856 Male, age 75, right hemisphere 1.5
1846 Male, age 80, right hemisphere 1.1
Putamen
nTPM: 1.6
1838 Male, age 80, right hemisphere 2.4
2466 Female, age 79, unknown 2.3
1937 Female, age 91, right hemisphere 1.9
2489 Female, age 72, unknown 1.9
1829 Male, age 74, unknown 1.4
2647 Male, age 75, left hemisphere 1.1
2482 Female, age 94, left hemisphere 0.2
Septal nuclei
nTPM: 1.3
2059 Female, age 85, both hemispheres 2.2
2394 Male, age 61, left hemisphere 1.7
2009 Female, age 91, both hemispheres 1.6
2629 Female, age 94, right hemisphere 1.3
1960 Male, age 74, unknown 1.1
2031 Female, age 72, unknown 1.0
2199 Male, age 80, right hemisphere 0.5

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.5
Samples: 246

Max nTPM: 1.4
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 0.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 0.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.5
Samples: 246

Max nTPM: 1.2
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 1.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1.0
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Brain - Putamen (basal ganglia)
Average nTPM: 0.4
Samples: 205

Max nTPM: 1.6
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 0.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 0.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 0.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 0.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 28.7
FF:10164-103B2 76 years, female 28.7
Globus pallidus
Scaled Tags Per Million: 19.1
FF:10161-103A8 76 years, female 19.3
FF:10175-103C4 60 years, female 18.9
Nucleus accumbens
Scaled Tags Per Million: 25.0
FF:10037-101F1 23-56 years, mixed 25.0
Putamen
Scaled Tags Per Million: 26.1
FF:10176-103C5 60 years, female 26.1

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The Human Protein Atlas

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