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ARL4C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:13.1 nTPM
HPA:13.1 nTPM
GTEx:11.8 nTPM
FANTOM5:6.6 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:21.8 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028927
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 8.1
1911 Female, age 85, right hemisphere 10.0
2621 Female, age 67, right hemisphere 8.6
2529 Female, age 94, left hemisphere 8.4
1898 Male, age 80, left hemisphere 8.3
1855 Male, age 76, left hemisphere 6.6
2148 Female, age 91, left hemisphere 6.6
Dentate gyrus
nTPM: 7.9
2528 Male, age 74, both hemispheres 9.5
2010 Male, age 76, both hemispheres 9.0
1927 Female, age 91, both hemispheres 8.6
2246 Female, age 85, both hemispheres 8.3
2530 Female, age 94, left hemisphere 5.9
2531 Female, age 67, both hemispheres 5.9
Entorhinal gyrus
nTPM: 11.6
2613 Female, age 94, left hemisphere 13.7
1787 Male, age 76, left hemisphere 12.7
2686 Male, age 75, right hemisphere 11.6
1938 Female, age 85, left hemisphere 11.2
2764 Male, age 80, right hemisphere 10.6
2117 Female, age 91, right hemisphere 9.7
Hippocampus, CA1
nTPM: 7.8
2082 Female, age 91, right hemisphere 9.9
2527 Male, age 74, both hemispheres 8.3
2045 Male, age 76, both hemispheres 7.3
1873 Female, age 85, both hemispheres 7.1
2749 Male, age 80, left hemisphere 6.5
Hippocampus, CA2
nTPM: 9.5
2437 Female, age 94, left hemisphere 11.7
2249 Male, age 74, both hemispheres 11.2
1892 Male, age 76, both hemispheres 10.2
1940 Female, age 85, left hemisphere 8.1
2113 Female, age 91, right hemisphere 8.1
1963 Male, age 80, left hemisphere 7.4
Hippocampus, CA3
nTPM: 9.4
2436 Male, age 74, both hemispheres 18.1
1867 Male, age 76, both hemispheres 11.4
1891 Female, age 85, both hemispheres 8.7
2137 Male, age 80, left hemisphere 6.9
2861 Female, age 67, both hemispheres 6.8
2620 Female, age 94, left hemisphere 4.6
Parahippocampal cortex
nTPM: 12.5
1990 Female, age 91, right hemisphere 15.7
2250 Female, age 67, right hemisphere 15.0
2245 Female, age 91, both hemispheres 13.1
2622 Female, age 67, right hemisphere 12.6
2693 Female, age 94, both hemispheres 12.5
2532 Female, age 72, left hemisphere 12.3
2018 Male, age 76, both hemispheres 12.2
1850 Male, age 80, both hemispheres 10.9
1933 Female, age 85, both hemispheres 10.7
2692 Male, age 74, both hemispheres 10.3
Perirhinal gyrus
nTPM: 13.1
1847 Female, age 91, left hemisphere 14.2
1794 Male, age 80, right hemisphere 14.0
2848 Male, age 76, right hemisphere 12.8
1841 Female, age 85, right hemisphere 12.7
2521 Female, age 94, right hemisphere 11.8
Subiculum
nTPM: 10.1
2619 Male, age 74, both hemispheres 13.1
1977 Female, age 85, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.0
1901 Male, age 80, both hemispheres 8.7
2042 Male, age 76, both hemispheres 8.3
2729 Female, age 91, right hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 38.5
Min nTPM: 2.3
Std nTPM: 7.0
Median nTPM: 9.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 38.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 35.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 33.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 33.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 31.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 30.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.9
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 28.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 26.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 25.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.6
FF:10153-102I9 76 years, female 8.0
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 14.1
Min nTPM: 7.8
Sample A Female 9.3
Sample B Female 7.8
Sample C Male 14.1
Sample D Male 8.0
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 24.2
Sample C Male 21.3
Sample D Male 19.0
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 19.9
Min nTPM: 8.7
Sample A Female 19.9
Sample B Female 9.8
Sample C Male 10.2
Sample D Male 8.7
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.3
Sample A Female 7.9
Sample B Female 7.6
Sample C Male 13.3
Sample D Male 7.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 24.2
Min nTPM: 20.0
Sample A Male 24.2
Sample B Male 22.2
Sample C Female 20.0
Sample D Female 20.9
Hippocampal formation
nTPM: 15.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.5
Sample A Male 16.4
Sample B Male 15.4
Sample C Female 14.5
Sample D Female 16.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
70430824 Antisense, RP_050614_02_B03, Mouse strain C57BL/6J (56 days, male) 5.0
74988455 Antisense, RP_060315_05_D10, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.