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C2orf80
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:27.2 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:15.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
1898 Male, age 80, left hemisphere 16.9
2148 Female, age 91, left hemisphere 16.3
1911 Female, age 85, right hemisphere 15.2
1855 Male, age 76, left hemisphere 14.7
2529 Female, age 94, left hemisphere 13.6
2621 Female, age 67, right hemisphere 13.6
Dentate gyrus
nTPM: 17.0
2531 Female, age 67, both hemispheres 22.6
1927 Female, age 91, both hemispheres 21.7
2246 Female, age 85, both hemispheres 20.3
2528 Male, age 74, both hemispheres 14.0
2010 Male, age 76, both hemispheres 12.1
2530 Female, age 94, left hemisphere 11.3
Entorhinal gyrus
nTPM: 18.5
1938 Female, age 85, left hemisphere 21.5
1787 Male, age 76, left hemisphere 21.2
2613 Female, age 94, left hemisphere 20.3
2764 Male, age 80, right hemisphere 18.4
2686 Male, age 75, right hemisphere 16.4
2117 Female, age 91, right hemisphere 13.0
Hippocampus, CA1
nTPM: 17.2
2045 Male, age 76, both hemispheres 23.8
2749 Male, age 80, left hemisphere 17.0
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 15.1
1873 Female, age 85, both hemispheres 14.9
Hippocampus, CA2
nTPM: 16.5
2113 Female, age 91, right hemisphere 20.8
2437 Female, age 94, left hemisphere 17.9
1892 Male, age 76, both hemispheres 17.0
2249 Male, age 74, both hemispheres 16.6
1940 Female, age 85, left hemisphere 16.4
1963 Male, age 80, left hemisphere 10.6
Hippocampus, CA3
nTPM: 19.6
2620 Female, age 94, left hemisphere 26.1
2137 Male, age 80, left hemisphere 23.7
1867 Male, age 76, both hemispheres 19.0
2861 Female, age 67, both hemispheres 17.9
1891 Female, age 85, both hemispheres 16.4
2436 Male, age 74, both hemispheres 14.3
Parahippocampal cortex
nTPM: 20.2
2693 Female, age 94, both hemispheres 27.6
2250 Female, age 67, right hemisphere 23.4
2245 Female, age 91, both hemispheres 22.8
1933 Female, age 85, both hemispheres 21.2
1990 Female, age 91, right hemisphere 20.3
2018 Male, age 76, both hemispheres 19.6
1850 Male, age 80, both hemispheres 19.4
2532 Female, age 72, left hemisphere 17.3
2622 Female, age 67, right hemisphere 16.9
2692 Male, age 74, both hemispheres 13.9
Perirhinal gyrus
nTPM: 27.2
1847 Female, age 91, left hemisphere 34.8
2521 Female, age 94, right hemisphere 27.7
1841 Female, age 85, right hemisphere 26.8
1794 Male, age 80, right hemisphere 24.2
2848 Male, age 76, right hemisphere 22.5
Subiculum
nTPM: 15.8
1977 Female, age 85, both hemispheres 19.3
1901 Male, age 80, both hemispheres 16.5
2438 Female, age 94, left hemisphere 15.6
2729 Female, age 91, right hemisphere 14.8
2619 Male, age 74, both hemispheres 14.7
2042 Male, age 76, both hemispheres 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.2
Samples: 197

Max nTPM: 114.5
Min nTPM: 1.7
Std nTPM: 17.2
Median nTPM: 23.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 114.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 86.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 75.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 68.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 66.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 62.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 61.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 58.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 58.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 55.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.1
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 45.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 7.7
Sample A Female 17.8
Sample B Female 15.6
Sample C Male 7.7
Sample D Male 15.9
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 12.8
Sample C Male 11.8
Sample D Male 12.7
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.8
Sample A Female 18.1
Sample B Female 14.8
Sample C Male 15.4
Sample D Male 15.9
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.0
Sample A Female 17.6
Sample B Female 12.0
Sample C Male 16.6
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 21.1
Min nTPM: 10.7
Sample A Male 10.7
Sample B Male 11.1
Sample C Female 18.2
Sample D Female 21.1
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 10.2
Sample A Male 21.1
Sample B Male 10.5
Sample C Female 10.2
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69609007 Antisense, RP_050426_04_F09, Mouse strain C57BL/6J (56 days, male) 0.0

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