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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:52.2 nTPM
HPA:52.2 nTPM
GTEx:46.7 nTPM
FANTOM5:129.0 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:19.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006960
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.2
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
2529 Female, age 94, left hemisphere 49.1
1855 Male, age 76, left hemisphere 49.0
1911 Female, age 85, right hemisphere 48.5
2621 Female, age 67, right hemisphere 47.4
1898 Male, age 80, left hemisphere 46.0
2148 Female, age 91, left hemisphere 42.5
Dentate gyrus
nTPM: 44.6
2530 Female, age 94, left hemisphere 52.6
2010 Male, age 76, both hemispheres 51.6
2528 Male, age 74, both hemispheres 45.0
2246 Female, age 85, both hemispheres 43.7
2531 Female, age 67, both hemispheres 37.9
1927 Female, age 91, both hemispheres 37.0
Entorhinal gyrus
nTPM: 45.3
2117 Female, age 91, right hemisphere 57.9
1787 Male, age 76, left hemisphere 46.7
2764 Male, age 80, right hemisphere 46.7
2686 Male, age 75, right hemisphere 41.6
1938 Female, age 85, left hemisphere 40.1
2613 Female, age 94, left hemisphere 38.7
Hippocampus, CA1
nTPM: 43.3
2082 Female, age 91, right hemisphere 46.8
2045 Male, age 76, both hemispheres 45.5
2527 Male, age 74, both hemispheres 45.3
1873 Female, age 85, both hemispheres 42.9
2749 Male, age 80, left hemisphere 36.1
Hippocampus, CA2
nTPM: 46.7
2249 Male, age 74, both hemispheres 51.6
2113 Female, age 91, right hemisphere 47.7
1963 Male, age 80, left hemisphere 47.6
2437 Female, age 94, left hemisphere 47.2
1940 Female, age 85, left hemisphere 46.8
1892 Male, age 76, both hemispheres 39.3
Hippocampus, CA3
nTPM: 42.5
1891 Female, age 85, both hemispheres 51.6
1867 Male, age 76, both hemispheres 49.2
2436 Male, age 74, both hemispheres 49.0
2137 Male, age 80, left hemisphere 37.5
2861 Female, age 67, both hemispheres 34.2
2620 Female, age 94, left hemisphere 33.8
Parahippocampal cortex
nTPM: 41.8
2018 Male, age 76, both hemispheres 52.6
2692 Male, age 74, both hemispheres 49.4
2532 Female, age 72, left hemisphere 45.8
1990 Female, age 91, right hemisphere 43.0
1850 Male, age 80, both hemispheres 41.1
2245 Female, age 91, both hemispheres 39.4
1933 Female, age 85, both hemispheres 39.1
2250 Female, age 67, right hemisphere 39.0
2693 Female, age 94, both hemispheres 36.6
2622 Female, age 67, right hemisphere 31.6
Perirhinal gyrus
nTPM: 36.9
2521 Female, age 94, right hemisphere 43.5
2848 Male, age 76, right hemisphere 37.1
1794 Male, age 80, right hemisphere 36.0
1847 Female, age 91, left hemisphere 35.3
1841 Female, age 85, right hemisphere 32.9
Subiculum
nTPM: 52.2
2042 Male, age 76, both hemispheres 68.6
1901 Male, age 80, both hemispheres 54.8
2438 Female, age 94, left hemisphere 52.2
1977 Female, age 85, both hemispheres 46.5
2619 Male, age 74, both hemispheres 46.1
2729 Female, age 91, right hemisphere 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 108.4
Min nTPM: 10.2
Std nTPM: 19.1
Median nTPM: 43.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 108.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 101.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 93.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 89.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 88.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 85.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 84.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 81.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 79.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 79.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 78.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.0
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 79.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 27.4
Min nTPM: 14.3
Sample A Female 27.4
Sample B Female 18.7
Sample C Male 25.0
Sample D Male 14.3
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 21.6
Sample C Male 24.3
Sample D Male 17.7
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 19.5
Sample A Female 26.9
Sample B Female 22.6
Sample C Male 21.4
Sample D Male 19.5
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.8
Sample A Female 20.4
Sample B Female 19.8
Sample C Male 25.8
Sample D Male 21.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 6.7
Sample A Male 17.0
Sample B Male 13.2
Sample C Female 9.9
Sample D Female 6.7
Hippocampal formation
nTPM: 19.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.1
Sample A Male 18.3
Sample B Male 19.2
Sample C Female 22.9
Sample D Female 18.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68269586 Antisense, RP_041129_01_H03, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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