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TMEM120A
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.7 nTPM
HPA:32.7 nTPM
GTEx:38.5 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:14.8 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 32.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 32.7
2290 Female, age 72, unknown 34.2
1854 Male, age 80, left hemisphere 33.8
1857 Female, age 85, left hemisphere 33.2
2289 Male, age 61, right hemisphere 33.1
1781 Male, age 74, unknown 32.1
2481 Female, age 94, left hemisphere 32.0
2846 Female, age 79, unknown 32.0
2288 Male, age 75, left hemisphere 31.4
Claustrum
nTPM: 31.7
2568 Male, age 61, both hemispheres 35.8
2284 Female, age 91, both hemispheres 33.8
2198 Male, age 80, both hemispheres 32.4
2645 Female, age 72, unknown 32.4
2491 Male, age 75, both hemispheres 31.1
2196 Female, age 79, unknown 30.5
2292 Female, age 85, both hemispheres 30.5
1956 Male, age 74, unknown 29.8
2392 Female, age 94, both hemispheres 28.9
Globus pallidus, externus
nTPM: 32.6
2772 Female, age 79, unknown 34.9
2646 Male, age 61, right hemisphere 34.8
1996 Male, age 80, right hemisphere 32.8
2395 Male, age 75, both hemispheres 30.3
2567 Female, age 72, unknown 30.3
Globus pallidus, internus
nTPM: 32.3
2037 Male, age 80, right hemisphere 35.4
1818 Male, age 74, unknown 34.9
2778 Female, age 91, both hemispheres 33.3
2483 Female, age 94, right hemisphere 32.1
2287 Male, age 75, right hemisphere 31.1
2111 Female, age 85, right hemisphere 29.7
2566 Female, age 72, unknown 29.5
Nucleus accumbens
nTPM: 32.6
2824 Male, age 61, right hemisphere 35.6
1806 Female, age 85, left hemisphere 34.9
1783 Male, age 74, unknown 33.1
2286 Male, age 75, left hemisphere 32.1
2698 Female, age 72, unknown 32.1
1856 Female, age 91, right hemisphere 31.1
2732 Male, age 80, right hemisphere 31.1
2391 Female, age 94, left hemisphere 30.7
Nucleus basalis of Meynert
nTPM: 32.2
2569 Male, age 61, both hemispheres 34.3
2393 Male, age 80, right hemisphere 32.1
2484 Female, age 94, left hemisphere 32.0
2821 Male, age 75, both hemispheres 30.5
Nucleus of the diagonal band
nTPM: 30.7
1979 Male, age 74, unknown 31.4
1812 Female, age 91, both hemispheres 30.8
2029 Male, age 61, right hemisphere 30.7
2195 Female, age 85, both hemispheres 30.4
2775 Male, age 80, right hemisphere 30.0
Olfactory tubercle
nTPM: 30.4
1998 Female, age 91, both hemispheres 31.6
2856 Male, age 75, right hemisphere 31.3
2487 Female, age 94, left hemisphere 29.6
1846 Male, age 80, right hemisphere 28.9
Putamen
nTPM: 32.2
2466 Female, age 79, unknown 33.3
2482 Female, age 94, left hemisphere 33.2
1937 Female, age 91, right hemisphere 33.0
1838 Male, age 80, right hemisphere 32.8
2647 Male, age 75, left hemisphere 31.6
2489 Female, age 72, unknown 30.9
1829 Male, age 74, unknown 30.8
Septal nuclei
nTPM: 30.5
2394 Male, age 61, left hemisphere 32.2
2199 Male, age 80, right hemisphere 32.0
1960 Male, age 74, unknown 31.8
2031 Female, age 72, unknown 30.6
2009 Female, age 91, both hemispheres 30.4
2059 Female, age 85, both hemispheres 29.7
2629 Female, age 94, right hemisphere 27.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 38.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 35.9
Samples: 246

Max nTPM: 61.5
Min nTPM: 17.6
Std nTPM: 7.6
Median nTPM: 35.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 61.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 56.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 54.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 53.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 52.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 52.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 51.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 51.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.5
Samples: 246

Max nTPM: 70.1
Min nTPM: 14.2
Std nTPM: 9.7
Median nTPM: 37.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 70.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 66.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 66.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 63.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 63.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 63.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 62.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 61.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 61.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 60.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 59.6
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Brain - Putamen (basal ganglia)
Average nTPM: 36.3
Samples: 205

Max nTPM: 69.9
Min nTPM: 17.7
Std nTPM: 7.7
Median nTPM: 35.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 55.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 54.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 53.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 50.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 50.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 50.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49.5
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 40.3
FF:10164-103B2 76 years, female 40.3
Globus pallidus
Scaled Tags Per Million: 28.8
FF:10161-103A8 76 years, female 36.3
FF:10175-103C4 60 years, female 21.3
Nucleus accumbens
Scaled Tags Per Million: 27.6
FF:10037-101F1 23-56 years, mixed 27.6
Putamen
Scaled Tags Per Million: 44.5
FF:10176-103C5 60 years, female 44.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Putamen
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Septum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral pallidum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 14.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 14.8
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.5
Sample A Male 15.7
Sample B Male 16.3
Sample C Female 13.5
Sample D Female 13.5
Septum
nTPM: 13.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.2
Sample A Male 12.7
Sample B Male 14.2
Sample C Female 14.0
Sample D Female 12.2
Ventral forebrain
nTPM: 14.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.5
Sample A Male 14.0
Sample B Male 12.5
Sample C Female 16.9
Sample D Female 13.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
71210938 Antisense, RP_050810_04_H05, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
71210938 Antisense, RP_050810_04_H05, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.