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JPT1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:44.3 nTPM
HPA:44.3 nTPM
GTEx:44.6 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:68.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059729
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.3
Sample id Sample description nTPM
Hippocampus
nTPM: 37.1
1898 Male, age 80, left hemisphere 44.5
2621 Female, age 67, right hemisphere 40.9
1855 Male, age 76, left hemisphere 36.1
2148 Female, age 91, left hemisphere 34.9
1911 Female, age 85, right hemisphere 33.3
2529 Female, age 94, left hemisphere 32.5
Dentate gyrus
nTPM: 38.1
1927 Female, age 91, both hemispheres 43.3
2246 Female, age 85, both hemispheres 39.2
2530 Female, age 94, left hemisphere 37.9
2531 Female, age 67, both hemispheres 37.3
2010 Male, age 76, both hemispheres 35.8
2528 Male, age 74, both hemispheres 34.9
Entorhinal gyrus
nTPM: 38.9
2613 Female, age 94, left hemisphere 45.8
1938 Female, age 85, left hemisphere 42.7
2764 Male, age 80, right hemisphere 41.1
1787 Male, age 76, left hemisphere 38.1
2117 Female, age 91, right hemisphere 33.2
2686 Male, age 75, right hemisphere 32.4
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 52.7
1873 Female, age 85, both hemispheres 39.9
2527 Male, age 74, both hemispheres 36.8
2082 Female, age 91, right hemisphere 36.2
2045 Male, age 76, both hemispheres 35.9
Hippocampus, CA2
nTPM: 38.0
1892 Male, age 76, both hemispheres 45.6
1963 Male, age 80, left hemisphere 42.7
1940 Female, age 85, left hemisphere 37.2
2437 Female, age 94, left hemisphere 36.4
2249 Male, age 74, both hemispheres 33.3
2113 Female, age 91, right hemisphere 32.6
Hippocampus, CA3
nTPM: 38.6
2137 Male, age 80, left hemisphere 42.9
2620 Female, age 94, left hemisphere 40.1
1867 Male, age 76, both hemispheres 39.5
2861 Female, age 67, both hemispheres 37.6
2436 Male, age 74, both hemispheres 37.0
1891 Female, age 85, both hemispheres 34.3
Parahippocampal cortex
nTPM: 39.7
2245 Female, age 91, both hemispheres 45.0
2250 Female, age 67, right hemisphere 42.9
1850 Male, age 80, both hemispheres 42.2
1933 Female, age 85, both hemispheres 42.0
2532 Female, age 72, left hemisphere 40.5
2693 Female, age 94, both hemispheres 39.9
1990 Female, age 91, right hemisphere 39.4
2018 Male, age 76, both hemispheres 37.0
2692 Male, age 74, both hemispheres 35.4
2622 Female, age 67, right hemisphere 32.7
Perirhinal gyrus
nTPM: 44.3
1847 Female, age 91, left hemisphere 55.7
1794 Male, age 80, right hemisphere 43.0
2521 Female, age 94, right hemisphere 43.0
1841 Female, age 85, right hemisphere 41.0
2848 Male, age 76, right hemisphere 38.9
Subiculum
nTPM: 35.7
1977 Female, age 85, both hemispheres 41.4
1901 Male, age 80, both hemispheres 37.4
2438 Female, age 94, left hemisphere 36.6
2619 Male, age 74, both hemispheres 34.8
2729 Female, age 91, right hemisphere 32.6
2042 Male, age 76, both hemispheres 31.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.6
Samples: 197

Max nTPM: 117.9
Min nTPM: 8.7
Std nTPM: 22.2
Median nTPM: 41.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 117.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 108.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 107.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 94.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 93.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 92.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 90.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 90.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 88.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 88.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 87.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10169-103B7 60 years, female 114.0
FF:10153-102I9 76 years, female 34.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 85.1
Min nTPM: 51.2
Sample A Female 85.1
Sample B Female 74.3
Sample C Male 51.2
Sample D Male 57.6
Entorhinal cortex
nTPM: 53.8
Samples: 4

Max nTPM: 60.2
Min nTPM: 48.3
Sample A Female 50.6
Sample B Female 60.2
Sample C Male 56.2
Sample D Male 48.3
Subiculum
nTPM: 64.1
Samples: 4

Max nTPM: 83.0
Min nTPM: 49.8
Sample A Female 83.0
Sample B Female 64.1
Sample C Male 59.4
Sample D Male 49.8
Ventral hippocampus
nTPM: 68.7
Samples: 4

Max nTPM: 82.6
Min nTPM: 54.6
Sample A Female 64.9
Sample B Female 54.6
Sample C Male 82.6
Sample D Male 72.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.