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BLOC1S2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:34.1 nTPM
HPA:34.1 nTPM
GTEx:63.1 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:58.5 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048088Antibody HPA055010
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 30.9
1898 Male, age 80, left hemisphere 34.9
1911 Female, age 85, right hemisphere 31.2
1855 Male, age 76, left hemisphere 30.4
2621 Female, age 67, right hemisphere 29.8
2148 Female, age 91, left hemisphere 29.6
2529 Female, age 94, left hemisphere 29.5
Dentate gyrus
nTPM: 32.3
1927 Female, age 91, both hemispheres 38.0
2010 Male, age 76, both hemispheres 32.4
2530 Female, age 94, left hemisphere 32.0
2528 Male, age 74, both hemispheres 31.6
2246 Female, age 85, both hemispheres 30.0
2531 Female, age 67, both hemispheres 29.8
Entorhinal gyrus
nTPM: 31.6
2613 Female, age 94, left hemisphere 32.9
1938 Female, age 85, left hemisphere 32.8
2764 Male, age 80, right hemisphere 32.5
1787 Male, age 76, left hemisphere 31.3
2686 Male, age 75, right hemisphere 30.2
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 33.0
2749 Male, age 80, left hemisphere 37.3
1873 Female, age 85, both hemispheres 33.3
2045 Male, age 76, both hemispheres 33.0
2527 Male, age 74, both hemispheres 31.3
2082 Female, age 91, right hemisphere 30.1
Hippocampus, CA2
nTPM: 31.9
1892 Male, age 76, both hemispheres 35.3
1963 Male, age 80, left hemisphere 34.6
2249 Male, age 74, both hemispheres 31.1
2113 Female, age 91, right hemisphere 30.8
1940 Female, age 85, left hemisphere 30.6
2437 Female, age 94, left hemisphere 28.9
Hippocampus, CA3
nTPM: 32.3
2137 Male, age 80, left hemisphere 38.3
1867 Male, age 76, both hemispheres 33.7
1891 Female, age 85, both hemispheres 32.3
2620 Female, age 94, left hemisphere 31.9
2436 Male, age 74, both hemispheres 30.2
2861 Female, age 67, both hemispheres 27.5
Parahippocampal cortex
nTPM: 31.6
1850 Male, age 80, both hemispheres 36.9
2693 Female, age 94, both hemispheres 32.7
1933 Female, age 85, both hemispheres 32.6
1990 Female, age 91, right hemisphere 32.3
2018 Male, age 76, both hemispheres 31.5
2250 Female, age 67, right hemisphere 31.3
2245 Female, age 91, both hemispheres 30.4
2532 Female, age 72, left hemisphere 30.3
2692 Male, age 74, both hemispheres 30.0
2622 Female, age 67, right hemisphere 28.3
Perirhinal gyrus
nTPM: 34.1
1794 Male, age 80, right hemisphere 35.6
1847 Female, age 91, left hemisphere 35.4
1841 Female, age 85, right hemisphere 34.6
2521 Female, age 94, right hemisphere 32.8
2848 Male, age 76, right hemisphere 32.2
Subiculum
nTPM: 31.5
1901 Male, age 80, both hemispheres 35.4
1977 Female, age 85, both hemispheres 32.3
2438 Female, age 94, left hemisphere 31.0
2729 Female, age 91, right hemisphere 30.8
2619 Male, age 74, both hemispheres 30.3
2042 Male, age 76, both hemispheres 29.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.1
Samples: 197

Max nTPM: 176.5
Min nTPM: 22.8
Std nTPM: 16.3
Median nTPM: 60.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 176.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 107.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 100.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 94.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 93.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 91.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 91.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 90.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 90.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 89.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 43.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 17.6
Min nTPM: 16.0
Sample A Female 17.4
Sample B Female 17.6
Sample C Male 16.0
Sample D Male 16.5
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 16.0
Sample A Female 16.0
Sample B Female 17.3
Sample C Male 16.9
Sample D Male 16.4
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 15.5
Sample A Female 16.5
Sample B Female 17.1
Sample C Male 15.5
Sample D Male 15.8
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.0
Sample A Female 15.8
Sample B Female 15.1
Sample C Male 13.0
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 64.6
Min nTPM: 47.3
Sample A Male 50.6
Sample B Male 64.6
Sample C Female 62.3
Sample D Female 47.3
Hippocampal formation
nTPM: 58.5
Samples: 4

Max nTPM: 71.0
Min nTPM: 52.3
Sample A Male 71.0
Sample B Male 55.8
Sample C Female 54.9
Sample D Female 52.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
77620441 Antisense, RP_070129_03_C08, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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