ABOUTMENU
HELP
NEWS
SEMA4A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.3 nTPM
HPA:25.3 nTPM
GTEx:13.4 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:22.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069136
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
1898 Male, age 80, left hemisphere 13.1
2621 Female, age 67, right hemisphere 13.0
2148 Female, age 91, left hemisphere 12.5
1911 Female, age 85, right hemisphere 12.4
2529 Female, age 94, left hemisphere 12.1
1855 Male, age 76, left hemisphere 11.5
Dentate gyrus
nTPM: 11.6
2246 Female, age 85, both hemispheres 16.5
2528 Male, age 74, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.2
2010 Male, age 76, both hemispheres 10.7
1927 Female, age 91, both hemispheres 10.3
2530 Female, age 94, left hemisphere 8.4
Entorhinal gyrus
nTPM: 25.3
2613 Female, age 94, left hemisphere 37.1
1938 Female, age 85, left hemisphere 27.8
2686 Male, age 75, right hemisphere 27.4
2764 Male, age 80, right hemisphere 23.0
1787 Male, age 76, left hemisphere 20.1
2117 Female, age 91, right hemisphere 16.2
Hippocampus, CA1
nTPM: 14.3
2527 Male, age 74, both hemispheres 20.9
2082 Female, age 91, right hemisphere 15.3
1873 Female, age 85, both hemispheres 12.5
2045 Male, age 76, both hemispheres 11.5
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 13.3
1940 Female, age 85, left hemisphere 16.5
2113 Female, age 91, right hemisphere 14.7
2249 Male, age 74, both hemispheres 13.2
2437 Female, age 94, left hemisphere 13.1
1892 Male, age 76, both hemispheres 11.7
1963 Male, age 80, left hemisphere 10.5
Hippocampus, CA3
nTPM: 12.8
2861 Female, age 67, both hemispheres 15.5
2436 Male, age 74, both hemispheres 15.3
1891 Female, age 85, both hemispheres 13.5
1867 Male, age 76, both hemispheres 11.7
2137 Male, age 80, left hemisphere 10.5
2620 Female, age 94, left hemisphere 10.2
Parahippocampal cortex
nTPM: 21.1
2692 Male, age 74, both hemispheres 26.7
1933 Female, age 85, both hemispheres 26.4
1850 Male, age 80, both hemispheres 24.8
2622 Female, age 67, right hemisphere 24.4
2693 Female, age 94, both hemispheres 20.3
1990 Female, age 91, right hemisphere 19.5
2250 Female, age 67, right hemisphere 19.1
2532 Female, age 72, left hemisphere 18.5
2245 Female, age 91, both hemispheres 16.9
2018 Male, age 76, both hemispheres 14.4
Perirhinal gyrus
nTPM: 21.9
1847 Female, age 91, left hemisphere 29.6
2521 Female, age 94, right hemisphere 22.7
1794 Male, age 80, right hemisphere 20.7
1841 Female, age 85, right hemisphere 20.0
2848 Male, age 76, right hemisphere 16.6
Subiculum
nTPM: 15.0
2619 Male, age 74, both hemispheres 20.1
1977 Female, age 85, both hemispheres 19.8
2729 Female, age 91, right hemisphere 14.4
2438 Female, age 94, left hemisphere 13.7
1901 Male, age 80, both hemispheres 11.1
2042 Male, age 76, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 57.5
Min nTPM: 2.4
Std nTPM: 7.0
Median nTPM: 12.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 33.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 33.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 32.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 28.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 28.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 28.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 27.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 27.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 24.6
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 9.8
Min nTPM: 4.6
Sample A Female 9.8
Sample B Female 9.1
Sample C Male 7.0
Sample D Male 4.6
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.4
Sample A Female 17.8
Sample B Female 13.7
Sample C Male 14.6
Sample D Male 13.4
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.2
Sample A Female 16.6
Sample B Female 11.3
Sample C Male 11.7
Sample D Male 10.2
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 14.9
Min nTPM: 8.2
Sample A Female 10.4
Sample B Female 8.2
Sample C Male 14.9
Sample D Male 9.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 23.9
Min nTPM: 22.1
Sample A Male 23.9
Sample B Male 22.9
Sample C Female 22.1
Sample D Female 22.3
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.5
Sample A Male 20.7
Sample B Male 18.6
Sample C Female 15.5
Sample D Female 17.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
943 Antisense, RP_Baylor_103027, Mouse strain C57BL/6J (56 days, male) 0.1
942 Antisense, RP_Baylor_103027, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.