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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:73.5 nTPM
HPA:73.5 nTPM
GTEx:139.6 nTPM
FANTOM5:305.5 Scaled Tags Per Million
Pig:204.6 nTPM
Mouse:395.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB005417Antibody CAB012406
Glial cells Not detectedNot detectedLowLow
Neuronal cells LowMediumLowMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
1898 Male, age 80, left hemisphere 60.7
2621 Female, age 67, right hemisphere 45.8
2529 Female, age 94, left hemisphere 36.8
1855 Male, age 76, left hemisphere 31.1
2148 Female, age 91, left hemisphere 30.8
1911 Female, age 85, right hemisphere 26.0
Dentate gyrus
nTPM: 42.5
1927 Female, age 91, both hemispheres 49.7
2530 Female, age 94, left hemisphere 48.1
2246 Female, age 85, both hemispheres 45.1
2528 Male, age 74, both hemispheres 40.4
2531 Female, age 67, both hemispheres 38.0
2010 Male, age 76, both hemispheres 33.4
Entorhinal gyrus
nTPM: 55.9
2764 Male, age 80, right hemisphere 80.8
1938 Female, age 85, left hemisphere 67.3
2613 Female, age 94, left hemisphere 67.1
1787 Male, age 76, left hemisphere 48.5
2686 Male, age 75, right hemisphere 38.0
2117 Female, age 91, right hemisphere 33.7
Hippocampus, CA1
nTPM: 38.1
2749 Male, age 80, left hemisphere 48.6
2527 Male, age 74, both hemispheres 44.7
1873 Female, age 85, both hemispheres 37.2
2082 Female, age 91, right hemisphere 31.3
2045 Male, age 76, both hemispheres 28.6
Hippocampus, CA2
nTPM: 44.2
2437 Female, age 94, left hemisphere 55.9
2249 Male, age 74, both hemispheres 55.3
1892 Male, age 76, both hemispheres 46.2
1963 Male, age 80, left hemisphere 41.7
1940 Female, age 85, left hemisphere 37.3
2113 Female, age 91, right hemisphere 28.8
Hippocampus, CA3
nTPM: 44.0
2436 Male, age 74, both hemispheres 81.4
2137 Male, age 80, left hemisphere 41.5
1891 Female, age 85, both hemispheres 38.4
2861 Female, age 67, both hemispheres 37.4
1867 Male, age 76, both hemispheres 32.6
2620 Female, age 94, left hemisphere 32.3
Parahippocampal cortex
nTPM: 55.2
1850 Male, age 80, both hemispheres 77.5
1933 Female, age 85, both hemispheres 67.6
2250 Female, age 67, right hemisphere 60.9
2532 Female, age 72, left hemisphere 60.6
2245 Female, age 91, both hemispheres 57.8
2693 Female, age 94, both hemispheres 52.9
1990 Female, age 91, right hemisphere 51.5
2692 Male, age 74, both hemispheres 46.3
2622 Female, age 67, right hemisphere 43.0
2018 Male, age 76, both hemispheres 33.7
Perirhinal gyrus
nTPM: 73.5
1847 Female, age 91, left hemisphere 88.6
1794 Male, age 80, right hemisphere 77.4
1841 Female, age 85, right hemisphere 76.5
2848 Male, age 76, right hemisphere 62.7
2521 Female, age 94, right hemisphere 62.5
Subiculum
nTPM: 43.0
1977 Female, age 85, both hemispheres 62.4
2619 Male, age 74, both hemispheres 49.3
2438 Female, age 94, left hemisphere 47.2
1901 Male, age 80, both hemispheres 43.0
2042 Male, age 76, both hemispheres 30.3
2729 Female, age 91, right hemisphere 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.6
Samples: 197

Max nTPM: 294.7
Min nTPM: 62.7
Std nTPM: 46.7
Median nTPM: 130.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 294.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 273.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 262.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 256.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 238.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 232.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 229.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 225.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 224.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 222.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 221.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 305.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 305.5
FF:10169-103B7 60 years, female 343.2
FF:10153-102I9 76 years, female 267.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 204.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 188.0
Samples: 4

Max nTPM: 240.4
Min nTPM: 158.1
Sample A Female 240.4
Sample B Female 186.2
Sample C Male 158.1
Sample D Male 167.2
Entorhinal cortex
nTPM: 173.7
Samples: 4

Max nTPM: 209.4
Min nTPM: 148.1
Sample A Female 209.4
Sample B Female 159.7
Sample C Male 177.4
Sample D Male 148.1
Subiculum
nTPM: 204.6
Samples: 4

Max nTPM: 251.0
Min nTPM: 179.2
Sample A Female 251.0
Sample B Female 182.0
Sample C Male 179.2
Sample D Male 206.2
Ventral hippocampus
nTPM: 179.3
Samples: 4

Max nTPM: 238.5
Min nTPM: 130.6
Sample A Female 209.3
Sample B Female 130.6
Sample C Male 238.5
Sample D Male 138.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 395.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 395.9
Samples: 4

Max nTPM: 490.3
Min nTPM: 347.1
Sample A Male 347.1
Sample B Male 391.6
Sample C Female 354.6
Sample D Female 490.3
Hippocampal formation
nTPM: 338.1
Samples: 4

Max nTPM: 366.3
Min nTPM: 321.5
Sample A Male 366.3
Sample B Male 321.5
Sample C Female 324.6
Sample D Female 340.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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