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POM121
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:12.0 nTPM
FANTOM5:25.3 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043809Antibody HPA049817Antibody CAB003710
Glial cells Not detectedNot detectedLow
Neuronal cells LowMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 8.6
2621 Female, age 67, right hemisphere 14.2
2148 Female, age 91, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.8
1898 Male, age 80, left hemisphere 6.5
1911 Female, age 85, right hemisphere 5.8
2529 Female, age 94, left hemisphere 5.4
Dentate gyrus
nTPM: 8.6
2531 Female, age 67, both hemispheres 11.5
2246 Female, age 85, both hemispheres 9.6
2010 Male, age 76, both hemispheres 8.8
2530 Female, age 94, left hemisphere 8.3
1927 Female, age 91, both hemispheres 7.5
2528 Male, age 74, both hemispheres 6.0
Entorhinal gyrus
nTPM: 11.1
2613 Female, age 94, left hemisphere 18.7
2686 Male, age 75, right hemisphere 12.5
2764 Male, age 80, right hemisphere 12.0
1787 Male, age 76, left hemisphere 8.9
1938 Female, age 85, left hemisphere 8.5
2117 Female, age 91, right hemisphere 6.3
Hippocampus, CA1
nTPM: 9.3
2045 Male, age 76, both hemispheres 15.2
2749 Male, age 80, left hemisphere 10.6
2527 Male, age 74, both hemispheres 8.2
1873 Female, age 85, both hemispheres 7.6
2082 Female, age 91, right hemisphere 4.8
Hippocampus, CA2
nTPM: 6.3
1892 Male, age 76, both hemispheres 12.8
2437 Female, age 94, left hemisphere 6.7
1940 Female, age 85, left hemisphere 5.6
2113 Female, age 91, right hemisphere 5.4
1963 Male, age 80, left hemisphere 4.9
2249 Male, age 74, both hemispheres 2.1
Hippocampus, CA3
nTPM: 11.9
2861 Female, age 67, both hemispheres 17.5
2620 Female, age 94, left hemisphere 17.1
1867 Male, age 76, both hemispheres 14.1
2137 Male, age 80, left hemisphere 12.5
2436 Male, age 74, both hemispheres 5.5
1891 Female, age 85, both hemispheres 5.0
Parahippocampal cortex
nTPM: 11.1
2622 Female, age 67, right hemisphere 18.5
2245 Female, age 91, both hemispheres 15.9
2532 Female, age 72, left hemisphere 13.5
2693 Female, age 94, both hemispheres 12.7
2692 Male, age 74, both hemispheres 11.2
2250 Female, age 67, right hemisphere 9.2
1933 Female, age 85, both hemispheres 8.7
1850 Male, age 80, both hemispheres 8.6
1990 Female, age 91, right hemisphere 6.8
2018 Male, age 76, both hemispheres 5.6
Perirhinal gyrus
nTPM: 9.4
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 9.6
1847 Female, age 91, left hemisphere 9.2
1794 Male, age 80, right hemisphere 8.8
1841 Female, age 85, right hemisphere 7.6
Subiculum
nTPM: 8.0
2619 Male, age 74, both hemispheres 11.6
2042 Male, age 76, both hemispheres 10.6
1901 Male, age 80, both hemispheres 8.2
2438 Female, age 94, left hemisphere 7.0
1977 Female, age 85, both hemispheres 6.9
2729 Female, age 91, right hemisphere 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 23.8
Min nTPM: 4.3
Std nTPM: 2.9
Median nTPM: 11.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 21.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 18.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 18.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 17.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 17.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.3
FF:10153-102I9 76 years, female 28.7
FF:10169-103B7 60 years, female 21.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.