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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:89.2 nTPM
HPA:89.2 nTPM
GTEx:87.6 nTPM
FANTOM5:214.7 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:16.6 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047549Antibody HPA062226Antibody CAB004254
Glial cells HighMediumHigh
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.2
Sample id Sample description nTPM
Hippocampus
nTPM: 80.6
1898 Male, age 80, left hemisphere 90.2
2529 Female, age 94, left hemisphere 82.9
1855 Male, age 76, left hemisphere 80.3
2621 Female, age 67, right hemisphere 78.0
2148 Female, age 91, left hemisphere 76.8
1911 Female, age 85, right hemisphere 75.6
Dentate gyrus
nTPM: 79.8
1927 Female, age 91, both hemispheres 84.8
2010 Male, age 76, both hemispheres 83.5
2528 Male, age 74, both hemispheres 80.2
2530 Female, age 94, left hemisphere 79.2
2246 Female, age 85, both hemispheres 78.3
2531 Female, age 67, both hemispheres 73.0
Entorhinal gyrus
nTPM: 81.3
2764 Male, age 80, right hemisphere 86.7
1938 Female, age 85, left hemisphere 86.1
2117 Female, age 91, right hemisphere 82.6
1787 Male, age 76, left hemisphere 81.9
2613 Female, age 94, left hemisphere 76.4
2686 Male, age 75, right hemisphere 74.0
Hippocampus, CA1
nTPM: 83.0
2749 Male, age 80, left hemisphere 94.3
1873 Female, age 85, both hemispheres 83.9
2527 Male, age 74, both hemispheres 80.8
2045 Male, age 76, both hemispheres 78.5
2082 Female, age 91, right hemisphere 77.6
Hippocampus, CA2
nTPM: 83.1
1892 Male, age 76, both hemispheres 90.4
1963 Male, age 80, left hemisphere 88.0
2249 Male, age 74, both hemispheres 85.5
1940 Female, age 85, left hemisphere 80.7
2437 Female, age 94, left hemisphere 77.0
2113 Female, age 91, right hemisphere 76.8
Hippocampus, CA3
nTPM: 80.1
1867 Male, age 76, both hemispheres 84.9
2137 Male, age 80, left hemisphere 84.8
2436 Male, age 74, both hemispheres 84.8
1891 Female, age 85, both hemispheres 82.2
2620 Female, age 94, left hemisphere 74.5
2861 Female, age 67, both hemispheres 69.6
Parahippocampal cortex
nTPM: 80.4
1850 Male, age 80, both hemispheres 91.3
1990 Female, age 91, right hemisphere 84.8
1933 Female, age 85, both hemispheres 84.1
2250 Female, age 67, right hemisphere 81.8
2532 Female, age 72, left hemisphere 79.9
2018 Male, age 76, both hemispheres 79.3
2245 Female, age 91, both hemispheres 79.3
2693 Female, age 94, both hemispheres 76.5
2692 Male, age 74, both hemispheres 75.6
2622 Female, age 67, right hemisphere 70.8
Perirhinal gyrus
nTPM: 89.2
1847 Female, age 91, left hemisphere 94.6
1841 Female, age 85, right hemisphere 91.2
1794 Male, age 80, right hemisphere 90.6
2521 Female, age 94, right hemisphere 84.7
2848 Male, age 76, right hemisphere 84.7
Subiculum
nTPM: 80.2
1977 Female, age 85, both hemispheres 86.3
1901 Male, age 80, both hemispheres 84.4
2619 Male, age 74, both hemispheres 78.6
2042 Male, age 76, both hemispheres 78.0
2438 Female, age 94, left hemisphere 77.0
2729 Female, age 91, right hemisphere 76.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.6
Samples: 197

Max nTPM: 126.6
Min nTPM: 60.8
Std nTPM: 12.7
Median nTPM: 85.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 126.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 122.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 121.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 119.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 115.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 113.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 113.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 111.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 110.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 110.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 214.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 214.7
FF:10169-103B7 60 years, female 295.0
FF:10153-102I9 76 years, female 134.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 9.3
Sample A Female 18.6
Sample B Female 14.3
Sample C Male 11.4
Sample D Male 9.3
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.0
Sample A Female 9.1
Sample B Female 12.5
Sample C Male 8.2
Sample D Male 7.0
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.8
Sample A Female 12.6
Sample B Female 11.4
Sample C Male 9.5
Sample D Male 7.8
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.3
Sample A Female 12.4
Sample B Female 9.3
Sample C Male 11.4
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.1
Sample A Male 15.5
Sample B Male 14.1
Sample C Female 15.7
Sample D Female 11.1
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.0
Sample A Male 18.9
Sample B Male 15.0
Sample C Female 15.5
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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