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ZNF585A
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.4 nTPM
HPA:5.4 nTPM
GTEx:5.1 nTPM
FANTOM5:22.5 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 5.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 5.2
2481 Female, age 94, left hemisphere 5.8
2288 Male, age 75, left hemisphere 5.6
1857 Female, age 85, left hemisphere 5.4
2846 Female, age 79, unknown 5.2
1854 Male, age 80, left hemisphere 5.1
2289 Male, age 61, right hemisphere 5.1
2290 Female, age 72, unknown 4.8
1781 Male, age 74, unknown 4.7
Claustrum
nTPM: 5.2
1956 Male, age 74, unknown 5.5
2284 Female, age 91, both hemispheres 5.4
2568 Male, age 61, both hemispheres 5.4
2196 Female, age 79, unknown 5.3
2198 Male, age 80, both hemispheres 5.2
2292 Female, age 85, both hemispheres 5.2
2392 Female, age 94, both hemispheres 5.2
2491 Male, age 75, both hemispheres 4.8
2645 Female, age 72, unknown 4.8
Globus pallidus, externus
nTPM: 4.9
2567 Female, age 72, unknown 5.7
1996 Male, age 80, right hemisphere 5.0
2646 Male, age 61, right hemisphere 4.9
2395 Male, age 75, both hemispheres 4.6
2772 Female, age 79, unknown 4.3
Globus pallidus, internus
nTPM: 5.4
2111 Female, age 85, right hemisphere 6.1
2778 Female, age 91, both hemispheres 6.1
2287 Male, age 75, right hemisphere 5.5
2566 Female, age 72, unknown 5.5
2037 Male, age 80, right hemisphere 5.2
1818 Male, age 74, unknown 4.9
2483 Female, age 94, right hemisphere 4.4
Nucleus accumbens
nTPM: 5.2
2391 Female, age 94, left hemisphere 6.2
2286 Male, age 75, left hemisphere 5.5
2698 Female, age 72, unknown 5.5
2824 Male, age 61, right hemisphere 5.4
1806 Female, age 85, left hemisphere 5.1
2732 Male, age 80, right hemisphere 4.9
1783 Male, age 74, unknown 4.6
1856 Female, age 91, right hemisphere 4.6
Nucleus basalis of Meynert
nTPM: 4.8
2393 Male, age 80, right hemisphere 5.1
2821 Male, age 75, both hemispheres 5.0
2484 Female, age 94, left hemisphere 4.7
2569 Male, age 61, both hemispheres 4.4
Nucleus of the diagonal band
nTPM: 5.0
1979 Male, age 74, unknown 5.5
2195 Female, age 85, both hemispheres 5.2
2775 Male, age 80, right hemisphere 4.9
1812 Female, age 91, both hemispheres 4.8
2029 Male, age 61, right hemisphere 4.8
Olfactory tubercle
nTPM: 5.0
2487 Female, age 94, left hemisphere 5.2
2856 Male, age 75, right hemisphere 5.2
1846 Male, age 80, right hemisphere 4.9
1998 Female, age 91, both hemispheres 4.6
Putamen
nTPM: 5.1
1838 Male, age 80, right hemisphere 5.4
2482 Female, age 94, left hemisphere 5.4
1937 Female, age 91, right hemisphere 5.1
1829 Male, age 74, unknown 5.0
2647 Male, age 75, left hemisphere 5.0
2489 Female, age 72, unknown 4.9
2466 Female, age 79, unknown 4.7
Septal nuclei
nTPM: 4.9
2629 Female, age 94, right hemisphere 5.5
2394 Male, age 61, left hemisphere 5.1
1960 Male, age 74, unknown 5.0
2199 Male, age 80, right hemisphere 5.0
2031 Female, age 72, unknown 4.8
2009 Female, age 91, both hemispheres 4.7
2059 Female, age 85, both hemispheres 4.5

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 5.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 4.8
Samples: 246

Max nTPM: 12.9
Min nTPM: 1.6
Std nTPM: 1.5
Median nTPM: 4.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 12.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 9.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 8.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 8.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 4.5
Samples: 246

Max nTPM: 17.5
Min nTPM: 1.6
Std nTPM: 1.6
Median nTPM: 4.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 17.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 8.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 8.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 7.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 7.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 7.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 7.3
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Brain - Putamen (basal ganglia)
Average nTPM: 5.1
Samples: 205

Max nTPM: 17.8
Min nTPM: 2.2
Std nTPM: 1.8
Median nTPM: 4.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 17.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 11.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 9.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 8.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 19.3
FF:10164-103B2 76 years, female 19.3
Globus pallidus
Scaled Tags Per Million: 22.5
FF:10161-103A8 76 years, female 28.5
FF:10175-103C4 60 years, female 16.5
Nucleus accumbens
Scaled Tags Per Million: 14.4
FF:10037-101F1 23-56 years, mixed 14.4
Putamen
Scaled Tags Per Million: 20.2
FF:10176-103C5 60 years, female 20.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.