ABOUTMENU
HELP
NEWS
GTF2E2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:12.6 nTPM
FANTOM5:31.7 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:22.4 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025065Antibody CAB009603
Glial cells Not detectedNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
2148 Female, age 91, left hemisphere 15.9
1898 Male, age 80, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.2
1911 Female, age 85, right hemisphere 14.9
1855 Male, age 76, left hemisphere 14.6
2529 Female, age 94, left hemisphere 13.8
Dentate gyrus
nTPM: 14.8
1927 Female, age 91, both hemispheres 16.0
2010 Male, age 76, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.5
2246 Female, age 85, both hemispheres 14.2
2528 Male, age 74, both hemispheres 13.8
2530 Female, age 94, left hemisphere 13.5
Entorhinal gyrus
nTPM: 14.3
1787 Male, age 76, left hemisphere 16.0
1938 Female, age 85, left hemisphere 14.8
2686 Male, age 75, right hemisphere 13.9
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.4
Hippocampus, CA1
nTPM: 15.9
2045 Male, age 76, both hemispheres 17.9
2749 Male, age 80, left hemisphere 16.7
1873 Female, age 85, both hemispheres 15.7
2527 Male, age 74, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.1
Hippocampus, CA2
nTPM: 14.7
1892 Male, age 76, both hemispheres 16.2
2437 Female, age 94, left hemisphere 15.0
1940 Female, age 85, left hemisphere 14.5
2249 Male, age 74, both hemispheres 14.4
2113 Female, age 91, right hemisphere 14.1
1963 Male, age 80, left hemisphere 13.9
Hippocampus, CA3
nTPM: 15.7
2620 Female, age 94, left hemisphere 17.5
2137 Male, age 80, left hemisphere 16.9
1867 Male, age 76, both hemispheres 16.7
2861 Female, age 67, both hemispheres 14.8
1891 Female, age 85, both hemispheres 14.5
2436 Male, age 74, both hemispheres 14.1
Parahippocampal cortex
nTPM: 14.4
2018 Male, age 76, both hemispheres 15.7
2692 Male, age 74, both hemispheres 14.9
1850 Male, age 80, both hemispheres 14.5
2250 Female, age 67, right hemisphere 14.5
1933 Female, age 85, both hemispheres 14.4
2245 Female, age 91, both hemispheres 14.4
2532 Female, age 72, left hemisphere 14.4
1990 Female, age 91, right hemisphere 14.0
2693 Female, age 94, both hemispheres 13.8
2622 Female, age 67, right hemisphere 13.6
Perirhinal gyrus
nTPM: 14.8
1847 Female, age 91, left hemisphere 15.8
1841 Female, age 85, right hemisphere 14.9
2521 Female, age 94, right hemisphere 14.9
2848 Male, age 76, right hemisphere 14.4
1794 Male, age 80, right hemisphere 14.1
Subiculum
nTPM: 15.2
2438 Female, age 94, left hemisphere 16.6
1901 Male, age 80, both hemispheres 16.5
2042 Male, age 76, both hemispheres 15.2
1977 Female, age 85, both hemispheres 14.8
2619 Male, age 74, both hemispheres 14.2
2729 Female, age 91, right hemisphere 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 21.1
Min nTPM: 6.8
Std nTPM: 2.5
Median nTPM: 12.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 19.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 19.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 18.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.7
FF:10169-103B7 60 years, female 34.5
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 9.9
Sample C Male 8.9
Sample D Male 10.3
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.2
Sample A Female 9.2
Sample B Female 9.9
Sample C Male 10.1
Sample D Male 10.6
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 9.8
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 9.4
Sample C Male 9.6
Sample D Male 9.8
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.5
Sample A Female 8.9
Sample B Female 10.0
Sample C Male 8.5
Sample D Male 9.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.9
Sample A Male 19.6
Sample B Male 22.3
Sample C Female 19.3
Sample D Female 17.9
Hippocampal formation
nTPM: 22.4
Samples: 4

Max nTPM: 23.9
Min nTPM: 21.8
Sample A Male 21.8
Sample B Male 22.1
Sample C Female 21.9
Sample D Female 23.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
583853 Antisense, RP_040831_01_B04, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.