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ZNF655
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.5 nTPM
HPA:5.5 nTPM
GTEx:11.0 nTPM
FANTOM5:71.4 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:27.4 nTPM
Allen mouse:0.9 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 5.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 4.4
1870 Female, age 42, unknown 6.2
2666 Male, age 74, left hemisphere 5.7
2586 Male, age 75, left hemisphere 5.5
1827 Male, age 72, unknown 5.1
2828 Female, age 72, unknown 4.0
1833 Male, age 53, unknown 3.9
2411 Female, age 72, unknown 3.9
1830 Male, age 51, unknown 3.7
2019 Male, age 18, unknown 3.0
2219 Male, age 76, both hemispheres 2.8
Dorsal raphe nucleus
nTPM: 3.6
2298 Female, age 72, unknown 5.0
2016 Female, age 72, unknown 3.4
2047 Male, age 72, unknown 3.3
1828 Male, age 53, unknown 3.2
2750 Male, age 76, both hemispheres 2.9
Inferior colliculus
nTPM: 4.6
2097 Female, age 72, unknown 6.3
1848 Female, age 42, unknown 4.7
1890 Male, age 53, unknown 4.1
2849 Male, age 72, unknown 3.3
Median raphe nucleus
nTPM: 5.5
2220 Male, age 76, midline 5.5
Pedunculopontine tegmental nucleus
nTPM: 3.3
2334 Male, age 80, both hemispheres 3.9
1921 Female, age 85, both hemispheres 3.7
2338 Male, age 61, both hemispheres 2.2
Periaquaductal grey, anterior
nTPM: 5.0
1947 Male, age 18, unknown 5.3
2502 Female, age 75, unknown 5.3
1795 Male, age 51, unknown 4.4
Periaquaductal grey, dorsal
nTPM: 3.6
1831 Male, age 72, unknown 5.3
1840 Male, age 53, unknown 3.7
2464 Female, age 72, unknown 3.4
2850 Male, age 76, both hemispheres 2.1
Periaquaductal grey, lateral
nTPM: 3.2
2140 Male, age 76, both hemispheres 3.3
2053 Male, age 18, unknown 3.2
2272 Male, age 74, both hemispheres 3.1
Pretectal area
nTPM: 3.8
1817 Female, age 42, unknown 5.5
1944 Female, age 72, unknown 5.3
1816 Male, age 51, unknown 5.1
2007 Male, age 72, unknown 4.8
1815 Male, age 53, unknown 4.3
2224 Female, age 72, unknown 4.1
2273 Male, age 74, both hemispheres 3.8
2667 Female, age 75, unknown 3.5
2316 Male, age 76, right hemisphere 2.9
2825 Male, age 18, unknown 2.2
2407 Male, age 75, both hemispheres 0.0
Red nucleus
nTPM: 5.1
2588 Male, age 74, left hemisphere 6.7
1904 Male, age 53, unknown 6.1
2503 Female, age 72, unknown 6.1
1821 Female, age 72, unknown 5.7
1954 Female, age 42, unknown 5.5
2227 Male, age 72, unknown 5.3
2769 Male, age 72, unknown 5.3
1865 Male, age 51, unknown 5.0
2785 Male, age 18, unknown 4.5
2823 Male, age 76, right hemisphere 4.3
2584 Male, age 75, left hemisphere 3.8
2725 Female, age 75, unknown 3.3
Substantia nigra
nTPM: 3.8
2583 Male, age 75, right hemisphere 6.2
1889 Female, age 72, unknown 5.4
2699 Male, age 18, unknown 4.7
2665 Male, age 74, both hemispheres 4.6
2590 Female, age 75, unknown 4.4
1851 Male, age 51, unknown 4.2
1941 Male, age 53, unknown 3.6
1916 Female, age 42, unknown 3.5
2241 Male, age 72, unknown 1.1
2409 Female, age 72, unknown 0.0
Superior colliculus
nTPM: 4.6
2261 Male, age 18, unknown 6.1
1895 Male, age 76, right hemisphere 5.5
1839 Male, age 51, unknown 5.4
2087 Female, age 72, unknown 5.1
1913 Female, age 42, unknown 4.7
2668 Female, age 75, unknown 4.7
1796 Male, age 53, unknown 4.5
1995 Male, age 72, unknown 4.4
2664 Male, age 75, both hemispheres 3.0
2587 Male, age 74, left hemisphere 2.2
Ventral tegmental area
nTPM: 3.9
2218 Male, age 76, both hemispheres 6.3
2410 Female, age 72, unknown 4.8
1915 Female, age 42, unknown 4.0
2223 Female, age 72, unknown 3.3
2021 Male, age 53, unknown 2.8
1942 Male, age 51, unknown 1.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 11.0
Samples: 139

Max nTPM: 22.2
Min nTPM: 4.5
Std nTPM: 2.9
Median nTPM: 10.7
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 22.2
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 20.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 19.4
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 17.6
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 17.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 16.2
GTEX-131XH-0011-R2b-SM-5DUVY 50-59 years, male 15.6
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 15.6
GTEX-1F48J-0011-R2a-SM-CL535 50-59 years, female 15.6
GTEX-12WSA-0011-R2a-SM-57WDK 60-69 years, male 15.1
GTEX-1B8SG-0011-R2b-SM-79OOT 50-59 years, male 14.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 71.4
FF:10158-103A5 76 years, female 71.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Midbrain
nTPM: 13.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.8
Sample A Female 13.7
Sample B Female 14.0
Sample C Male 11.8
Sample D Male 13.2
Periaqueductal gray
nTPM: 13.9
Samples: 3

Max nTPM: 15.6
Min nTPM: 12.9
Sample B Female 13.2
Sample C Male 15.6
Sample D Male 12.9
Substantia nigra
nTPM: 15.0
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.2
Sample A Female 14.2
Sample B Female 14.9
Sample C Male 14.5
Sample D Male 16.2
Superior colliculi
nTPM: 11.9
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.3
Sample A Female 11.9
Sample B Female 10.3
Sample C Male 11.3
Sample D Male 14.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 27.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 27.4
Samples: 4

Max nTPM: 29.4
Min nTPM: 24.2
Sample A Male 28.2
Sample B Male 29.4
Sample C Female 27.7
Sample D Female 24.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.9
77925743 Antisense, RP_070219_02_C02, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.