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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:104.9 nTPM
HPA:104.9 nTPM
GTEx:135.9 nTPM
FANTOM5:177.5 Scaled Tags Per Million
Pig:203.2 nTPM
Mouse:38.0 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014372
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 104.9
Sample id Sample description nTPM
Hippocampus
nTPM: 85.8
2529 Female, age 94, left hemisphere 96.0
1911 Female, age 85, right hemisphere 94.9
1855 Male, age 76, left hemisphere 85.8
2621 Female, age 67, right hemisphere 80.3
2148 Female, age 91, left hemisphere 78.8
1898 Male, age 80, left hemisphere 78.7
Dentate gyrus
nTPM: 79.6
2010 Male, age 76, both hemispheres 85.5
2530 Female, age 94, left hemisphere 84.0
2528 Male, age 74, both hemispheres 82.8
2246 Female, age 85, both hemispheres 77.0
2531 Female, age 67, both hemispheres 76.9
1927 Female, age 91, both hemispheres 71.3
Entorhinal gyrus
nTPM: 96.9
2117 Female, age 91, right hemisphere 136.7
2764 Male, age 80, right hemisphere 106.4
2686 Male, age 75, right hemisphere 91.3
2613 Female, age 94, left hemisphere 87.2
1938 Female, age 85, left hemisphere 86.5
1787 Male, age 76, left hemisphere 73.3
Hippocampus, CA1
nTPM: 77.8
2527 Male, age 74, both hemispheres 94.0
2082 Female, age 91, right hemisphere 86.1
1873 Female, age 85, both hemispheres 82.6
2749 Male, age 80, left hemisphere 70.7
2045 Male, age 76, both hemispheres 55.4
Hippocampus, CA2
nTPM: 83.0
1963 Male, age 80, left hemisphere 104.9
2249 Male, age 74, both hemispheres 92.0
2113 Female, age 91, right hemisphere 91.4
2437 Female, age 94, left hemisphere 82.1
1940 Female, age 85, left hemisphere 66.8
1892 Male, age 76, both hemispheres 60.5
Hippocampus, CA3
nTPM: 73.5
1891 Female, age 85, both hemispheres 114.4
1867 Male, age 76, both hemispheres 75.3
2436 Male, age 74, both hemispheres 72.0
2861 Female, age 67, both hemispheres 61.2
2137 Male, age 80, left hemisphere 60.4
2620 Female, age 94, left hemisphere 57.5
Parahippocampal cortex
nTPM: 83.1
2692 Male, age 74, both hemispheres 106.5
1990 Female, age 91, right hemisphere 105.4
1850 Male, age 80, both hemispheres 89.8
2532 Female, age 72, left hemisphere 89.5
1933 Female, age 85, both hemispheres 81.4
2245 Female, age 91, both hemispheres 78.4
2018 Male, age 76, both hemispheres 76.0
2693 Female, age 94, both hemispheres 73.8
2250 Female, age 67, right hemisphere 65.3
2622 Female, age 67, right hemisphere 65.0
Perirhinal gyrus
nTPM: 68.7
1847 Female, age 91, left hemisphere 74.3
2521 Female, age 94, right hemisphere 69.8
1794 Male, age 80, right hemisphere 69.1
2848 Male, age 76, right hemisphere 66.8
1841 Female, age 85, right hemisphere 63.4
Subiculum
nTPM: 104.9
2438 Female, age 94, left hemisphere 117.4
1901 Male, age 80, both hemispheres 117.0
2042 Male, age 76, both hemispheres 110.4
1977 Female, age 85, both hemispheres 106.9
2619 Male, age 74, both hemispheres 92.1
2729 Female, age 91, right hemisphere 85.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.9
Samples: 197

Max nTPM: 595.9
Min nTPM: 7.1
Std nTPM: 89.8
Median nTPM: 113.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 595.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 491.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 462.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 431.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 409.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 352.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 334.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 310.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 301.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 287.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 282.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.5
FF:10153-102I9 76 years, female 203.3
FF:10169-103B7 60 years, female 151.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 203.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 203.2
Samples: 4

Max nTPM: 313.6
Min nTPM: 56.4
Sample A Female 313.6
Sample B Female 147.5
Sample C Male 295.3
Sample D Male 56.4
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 109.9
Min nTPM: 42.3
Sample A Female 42.3
Sample B Female 109.9
Sample C Male 43.2
Sample D Male 76.5
Subiculum
nTPM: 71.8
Samples: 4

Max nTPM: 91.1
Min nTPM: 55.0
Sample A Female 83.0
Sample B Female 91.1
Sample C Male 55.0
Sample D Male 58.2
Ventral hippocampus
nTPM: 116.8
Samples: 4

Max nTPM: 164.6
Min nTPM: 68.1
Sample A Female 131.5
Sample B Female 68.1
Sample C Male 102.9
Sample D Male 164.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 4.6
Sample A Male 27.4
Sample B Male 20.3
Sample C Female 16.1
Sample D Female 4.6
Hippocampal formation
nTPM: 38.0
Samples: 4

Max nTPM: 50.2
Min nTPM: 30.9
Sample A Male 30.9
Sample B Male 34.8
Sample C Female 50.2
Sample D Female 35.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69116504 Antisense, RP_050317_02_G03, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

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