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CACNA1E
HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		121.961
Protein expressioni No data
RNA expressioni
Consensus:42.8 nTPM
HPA:42.8 nTPM
GTEx:7.5 nTPM
FANTOM5:88.2 Scaled Tags Per Million
Pig:39.9 nTPM
Mouse:29.2 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079032
Hippocampal formation mean intensity 121.961
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 54.105
Molecular layer of the dentate gyrus 52.455
Granular dentate gyrus 10.483
CA1 - oriens layer 81.600
CA1 - pyramidal layer 26.440
CA1 - radiatum layer 77.701
CA2 - oriens layer 92.738
CA2 - pyramidal layer 38.162
CA2 - radiatum layer 76.449
CA3 - oriens layer 74.320
CA3 - pyramidal layer 29.584
CA3 - radiatum layer 82.976
Stratum lucidum 57.798
Lacunosum moleculare 59.711
Subiculum 30.766

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
2148 Female, age 91, left hemisphere 50.0
2621 Female, age 67, right hemisphere 36.2
1855 Male, age 76, left hemisphere 25.0
1898 Male, age 80, left hemisphere 20.4
1911 Female, age 85, right hemisphere 14.6
2529 Female, age 94, left hemisphere 0.6
Dentate gyrus
nTPM: 37.0
2531 Female, age 67, both hemispheres 76.9
1927 Female, age 91, both hemispheres 55.0
2528 Male, age 74, both hemispheres 32.6
2246 Female, age 85, both hemispheres 27.9
2010 Male, age 76, both hemispheres 17.6
2530 Female, age 94, left hemisphere 11.8
Entorhinal gyrus
nTPM: 18.7
2764 Male, age 80, right hemisphere 29.6
2613 Female, age 94, left hemisphere 29.3
1938 Female, age 85, left hemisphere 18.8
2686 Male, age 75, right hemisphere 15.6
1787 Male, age 76, left hemisphere 15.0
2117 Female, age 91, right hemisphere 4.0
Hippocampus, CA1
nTPM: 42.3
2749 Male, age 80, left hemisphere 61.8
2045 Male, age 76, both hemispheres 47.3
2527 Male, age 74, both hemispheres 41.2
2082 Female, age 91, right hemisphere 33.6
1873 Female, age 85, both hemispheres 27.4
Hippocampus, CA2
nTPM: 14.8
1963 Male, age 80, left hemisphere 27.6
1892 Male, age 76, both hemispheres 22.5
2249 Male, age 74, both hemispheres 21.0
2113 Female, age 91, right hemisphere 17.7
2437 Female, age 94, left hemisphere 0.3
1940 Female, age 85, left hemisphere 0.0
Hippocampus, CA3
nTPM: 42.8
2620 Female, age 94, left hemisphere 88.8
2861 Female, age 67, both hemispheres 67.6
2137 Male, age 80, left hemisphere 58.8
2436 Male, age 74, both hemispheres 20.6
1867 Male, age 76, both hemispheres 14.1
1891 Female, age 85, both hemispheres 6.9
Parahippocampal cortex
nTPM: 19.9
2693 Female, age 94, both hemispheres 33.9
2245 Female, age 91, both hemispheres 32.4
1933 Female, age 85, both hemispheres 22.2
1850 Male, age 80, both hemispheres 21.4
2622 Female, age 67, right hemisphere 20.3
2250 Female, age 67, right hemisphere 16.8
2532 Female, age 72, left hemisphere 15.6
1990 Female, age 91, right hemisphere 14.4
2018 Male, age 76, both hemispheres 11.3
2692 Male, age 74, both hemispheres 10.7
Perirhinal gyrus
nTPM: 30.9
1847 Female, age 91, left hemisphere 50.9
2521 Female, age 94, right hemisphere 48.5
1794 Male, age 80, right hemisphere 22.3
2848 Male, age 76, right hemisphere 20.8
1841 Female, age 85, right hemisphere 11.9
Subiculum
nTPM: 11.5
2729 Female, age 91, right hemisphere 24.9
1977 Female, age 85, both hemispheres 20.8
1901 Male, age 80, both hemispheres 16.8
2619 Male, age 74, both hemispheres 6.9
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.5
Samples: 197

Max nTPM: 23.6
Min nTPM: 0.1
Std nTPM: 4.8
Median nTPM: 7.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 20.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 18.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 18.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 18.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 17.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 17.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 16.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.2
FF:10169-103B7 60 years, female 132.8
FF:10153-102I9 76 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 47.6
Min nTPM: 22.0
Sample A Female 35.8
Sample B Female 47.6
Sample C Male 22.0
Sample D Male 34.3
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 32.7
Min nTPM: 26.9
Sample A Female 30.5
Sample B Female 26.9
Sample C Male 32.7
Sample D Male 28.7
Subiculum
nTPM: 39.9
Samples: 4

Max nTPM: 54.6
Min nTPM: 29.9
Sample A Female 54.6
Sample B Female 36.8
Sample C Male 38.2
Sample D Male 29.9
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 53.0
Min nTPM: 21.1
Sample A Female 21.1
Sample B Female 26.4
Sample C Male 28.3
Sample D Male 53.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 41.7
Min nTPM: 22.2
Sample A Male 27.1
Sample B Male 22.2
Sample C Female 25.7
Sample D Female 41.7
Hippocampal formation
nTPM: 27.1
Samples: 4

Max nTPM: 39.1
Min nTPM: 16.7
Sample A Male 17.1
Sample B Male 35.3
Sample C Female 39.1
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
74988669 Antisense, RP_060315_04_A04, Mouse strain C57BL/6J (56 days, male) 16.9
69236897 Antisense, RP_050331_01_D09, Mouse strain C57BL/6J (56 days, male) 15.1

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The Human Protein Atlas

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