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TCAF1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:22.2 nTPM
FANTOM5:70.5 Scaled Tags Per Million
Pig:71.7 nTPM
Mouse:103.1 nTPM
Allen mouse:16.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Amygdala
nTPM: 12.5
2514 Male, age 75, right hemisphere 15.4
2814 Male, age 76, right hemisphere 15.3
1987 Female, age 91, left hemisphere 12.5
2517 Female, age 94, left hemisphere 10.6
2695 Female, age 67, right hemisphere 8.6
Basal amygdala
nTPM: 15.3
2243 Female, age 91, right hemisphere 18.7
2685 Female, age 94, left hemisphere 17.8
2609 Male, age 75, right hemisphere 14.4
1955 Male, age 76, both hemispheres 13.8
2827 Female, age 67, right hemisphere 13.8
2110 Male, age 80, left hemisphere 13.1
Central amygdala
nTPM: 14.2
1905 Male, age 76, both hemispheres 16.3
2239 Male, age 80, left hemisphere 14.7
2701 Female, age 91, right hemisphere 13.9
2515 Male, age 75, right hemisphere 13.7
2826 Female, age 94, left hemisphere 12.2
Corticomedial amygdala
nTPM: 17.5
2829 Male, age 80, left hemisphere 22.0
2242 Female, age 91, right hemisphere 21.8
2429 Female, age 94, left hemisphere 21.5
2240 Male, age 76, both hemispheres 15.9
2428 Male, age 75, right hemisphere 11.9
2535 Female, age 67, right hemisphere 11.8
Lateral amygdala
nTPM: 12.7
1883 Male, age 76, both hemispheres 18.2
2516 Male, age 75, right hemisphere 15.9
2255 Female, age 91, right hemisphere 12.0
2534 Female, age 94, left hemisphere 12.0
2256 Male, age 80, left hemisphere 9.2
2830 Female, age 67, right hemisphere 8.7
Stria terminalis, bed nucleus
nTPM: 22.7
2486 Female, age 94, both hemispheres 26.8
1974 Female, age 91, both hemispheres 22.6
2201 Male, age 74, unknown 18.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 22.2
Samples: 152

Max nTPM: 42.8
Min nTPM: 10.4
Std nTPM: 6.2
Median nTPM: 21.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 42.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 40.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 39.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 38.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 38.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 37.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 37.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 36.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 34.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 33.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 32.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 70.5
FF:10151-102I7 76 years, female 70.5

AMYGDALA - Pig RNA-seqi
Average nTPM 71.7
Pig sample Sample description nTPM
Amygdala
nTPM: 71.7
Samples: 4

Max nTPM: 97.1
Min nTPM: 56.2
Sample A Female 97.1
Sample B Female 56.2
Sample C Male 58.1
Sample D Male 75.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 103.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 103.1
Samples: 4

Max nTPM: 115.8
Min nTPM: 89.8
Sample A Male 115.8
Sample B Male 102.9
Sample C Female 89.8
Sample D Female 103.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 16.6
68633107 Antisense, RP_050125_02_D08, Mouse strain C57BL/6J (56 days, male) 21.8
71211695 Antisense, RP_050816_02_B09, Mouse strain C57BL/6J (56 days, male) 11.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.