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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.8 nTPM
HPA:26.8 nTPM
GTEx:40.9 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:6.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB026820
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.4
2529 Female, age 94, left hemisphere 25.8
2621 Female, age 67, right hemisphere 25.3
1855 Male, age 76, left hemisphere 23.2
2148 Female, age 91, left hemisphere 22.6
1911 Female, age 85, right hemisphere 22.5
1898 Male, age 80, left hemisphere 20.9
Dentate gyrus
nTPM: 24.5
2530 Female, age 94, left hemisphere 33.3
2531 Female, age 67, both hemispheres 26.2
2010 Male, age 76, both hemispheres 26.0
2246 Female, age 85, both hemispheres 22.3
1927 Female, age 91, both hemispheres 19.6
2528 Male, age 74, both hemispheres 19.4
Entorhinal gyrus
nTPM: 26.8
2117 Female, age 91, right hemisphere 29.8
2686 Male, age 75, right hemisphere 29.4
2613 Female, age 94, left hemisphere 28.4
2764 Male, age 80, right hemisphere 27.9
1787 Male, age 76, left hemisphere 22.9
1938 Female, age 85, left hemisphere 22.2
Hippocampus, CA1
nTPM: 23.7
2045 Male, age 76, both hemispheres 26.9
2082 Female, age 91, right hemisphere 26.7
2749 Male, age 80, left hemisphere 25.1
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 18.7
Hippocampus, CA2
nTPM: 23.7
1963 Male, age 80, left hemisphere 25.6
2113 Female, age 91, right hemisphere 25.0
2437 Female, age 94, left hemisphere 24.2
1940 Female, age 85, left hemisphere 23.5
1892 Male, age 76, both hemispheres 22.5
2249 Male, age 74, both hemispheres 21.6
Hippocampus, CA3
nTPM: 24.6
1867 Male, age 76, both hemispheres 28.4
2436 Male, age 74, both hemispheres 25.9
2137 Male, age 80, left hemisphere 25.1
1891 Female, age 85, both hemispheres 23.9
2861 Female, age 67, both hemispheres 23.7
2620 Female, age 94, left hemisphere 20.4
Parahippocampal cortex
nTPM: 25.0
2532 Female, age 72, left hemisphere 30.8
2018 Male, age 76, both hemispheres 29.1
2622 Female, age 67, right hemisphere 26.7
1990 Female, age 91, right hemisphere 26.6
2245 Female, age 91, both hemispheres 25.2
2692 Male, age 74, both hemispheres 24.9
1933 Female, age 85, both hemispheres 24.0
2693 Female, age 94, both hemispheres 21.5
1850 Male, age 80, both hemispheres 21.3
2250 Female, age 67, right hemisphere 19.6
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 24.3
1841 Female, age 85, right hemisphere 22.6
1794 Male, age 80, right hemisphere 22.0
2521 Female, age 94, right hemisphere 21.8
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 25.9
1901 Male, age 80, both hemispheres 29.9
2042 Male, age 76, both hemispheres 29.3
1977 Female, age 85, both hemispheres 27.2
2438 Female, age 94, left hemisphere 24.9
2729 Female, age 91, right hemisphere 22.4
2619 Male, age 74, both hemispheres 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.9
Samples: 197

Max nTPM: 152.2
Min nTPM: 10.9
Std nTPM: 22.3
Median nTPM: 35.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 152.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 134.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 113.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 110.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 101.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 95.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 89.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 87.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 86.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 86.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 85.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.8
FF:10153-102I9 76 years, female 17.1
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 11.0
Min nTPM: 3.6
Sample A Female 8.4
Sample B Female 7.0
Sample C Male 11.0
Sample D Male 3.6
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.2
Sample A Female 5.4
Sample B Female 6.6
Sample C Male 7.1
Sample D Male 4.2
Subiculum
nTPM: 7.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.6
Sample A Female 8.7
Sample B Female 7.4
Sample C Male 7.1
Sample D Male 5.6
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 4.4
Sample A Female 4.4
Sample B Female 6.7
Sample C Male 10.1
Sample D Male 7.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 5.4
Min nTPM: 5.1
Sample A Male 5.2
Sample B Male 5.1
Sample C Female 5.1
Sample D Female 5.4
Hippocampal formation
nTPM: 6.8
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 6.7
Sample C Female 7.9
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79544896 Antisense, RP_071018_01_D02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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