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CTNND1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:25.3 nTPM
FANTOM5:65.6 Scaled Tags Per Million
Pig:35.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015954Antibody HPA015955Antibody CAB003837
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2529 Female, age 94, left hemisphere 28.4
2621 Female, age 67, right hemisphere 25.8
1911 Female, age 85, right hemisphere 23.5
2148 Female, age 91, left hemisphere 21.7
1855 Male, age 76, left hemisphere 21.2
1898 Male, age 80, left hemisphere 20.7
Dentate gyrus
nTPM: 21.4
2528 Male, age 74, both hemispheres 24.7
2530 Female, age 94, left hemisphere 22.9
2531 Female, age 67, both hemispheres 21.9
2246 Female, age 85, both hemispheres 21.7
2010 Male, age 76, both hemispheres 19.7
1927 Female, age 91, both hemispheres 17.6
Entorhinal gyrus
nTPM: 23.8
1787 Male, age 76, left hemisphere 26.9
2117 Female, age 91, right hemisphere 26.3
1938 Female, age 85, left hemisphere 26.2
2686 Male, age 75, right hemisphere 23.8
2764 Male, age 80, right hemisphere 22.2
2613 Female, age 94, left hemisphere 17.3
Hippocampus, CA1
nTPM: 20.9
2527 Male, age 74, both hemispheres 25.8
2082 Female, age 91, right hemisphere 24.6
2045 Male, age 76, both hemispheres 21.0
1873 Female, age 85, both hemispheres 17.6
2749 Male, age 80, left hemisphere 15.3
Hippocampus, CA2
nTPM: 24.5
1940 Female, age 85, left hemisphere 28.8
2249 Male, age 74, both hemispheres 26.4
2437 Female, age 94, left hemisphere 25.9
2113 Female, age 91, right hemisphere 25.8
1963 Male, age 80, left hemisphere 20.6
1892 Male, age 76, both hemispheres 19.6
Hippocampus, CA3
nTPM: 22.9
2436 Male, age 74, both hemispheres 27.0
2861 Female, age 67, both hemispheres 25.6
1891 Female, age 85, both hemispheres 24.1
1867 Male, age 76, both hemispheres 24.0
2620 Female, age 94, left hemisphere 19.1
2137 Male, age 80, left hemisphere 17.8
Parahippocampal cortex
nTPM: 25.6
2250 Female, age 67, right hemisphere 27.2
1990 Female, age 91, right hemisphere 26.6
1933 Female, age 85, both hemispheres 26.5
2622 Female, age 67, right hemisphere 26.0
2532 Female, age 72, left hemisphere 25.9
2693 Female, age 94, both hemispheres 25.7
2692 Male, age 74, both hemispheres 25.2
2245 Female, age 91, both hemispheres 24.7
1850 Male, age 80, both hemispheres 24.0
2018 Male, age 76, both hemispheres 23.7
Perirhinal gyrus
nTPM: 24.9
2521 Female, age 94, right hemisphere 30.1
1841 Female, age 85, right hemisphere 26.3
1794 Male, age 80, right hemisphere 23.6
2848 Male, age 76, right hemisphere 22.4
1847 Female, age 91, left hemisphere 21.9
Subiculum
nTPM: 26.6
2438 Female, age 94, left hemisphere 29.6
2619 Male, age 74, both hemispheres 28.8
2042 Male, age 76, both hemispheres 28.0
2729 Female, age 91, right hemisphere 26.4
1977 Female, age 85, both hemispheres 23.7
1901 Male, age 80, both hemispheres 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 55.8
Min nTPM: 10.6
Std nTPM: 6.5
Median nTPM: 24.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 55.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 43.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 41.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 40.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 39.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 37.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 36.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 35.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.6
FF:10153-102I9 76 years, female 77.9
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 39.1
Min nTPM: 25.9
Sample A Female 39.1
Sample B Female 32.4
Sample C Male 34.6
Sample D Male 25.9
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 30.8
Sample A Female 37.8
Sample B Female 37.1
Sample C Male 35.1
Sample D Male 30.8
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.2
Sample A Female 34.8
Sample B Female 29.4
Sample C Male 28.2
Sample D Male 31.3
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 37.2
Min nTPM: 25.9
Sample A Female 29.5
Sample B Female 25.9
Sample C Male 36.1
Sample D Male 37.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.