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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:16.0 nTPM
HPA:16.0 nTPM
GTEx:13.9 nTPM
FANTOM5:30.3 Scaled Tags Per Million
Pig:65.4 nTPM
Mouse:38.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061803Antibody HPA062802Antibody CAB046022
Glial cells Not detectedLowNot detected
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
2621 Female, age 67, right hemisphere 18.8
1898 Male, age 80, left hemisphere 18.0
2529 Female, age 94, left hemisphere 17.9
1911 Female, age 85, right hemisphere 11.5
1855 Male, age 76, left hemisphere 9.7
2148 Female, age 91, left hemisphere 8.8
Dentate gyrus
nTPM: 12.8
2530 Female, age 94, left hemisphere 24.1
2010 Male, age 76, both hemispheres 12.6
1927 Female, age 91, both hemispheres 11.6
2531 Female, age 67, both hemispheres 11.1
2246 Female, age 85, both hemispheres 10.6
2528 Male, age 74, both hemispheres 6.6
Entorhinal gyrus
nTPM: 14.2
2686 Male, age 75, right hemisphere 17.7
2764 Male, age 80, right hemisphere 15.0
2117 Female, age 91, right hemisphere 14.6
1938 Female, age 85, left hemisphere 14.1
2613 Female, age 94, left hemisphere 13.4
1787 Male, age 76, left hemisphere 10.1
Hippocampus, CA1
nTPM: 12.4
2749 Male, age 80, left hemisphere 18.7
1873 Female, age 85, both hemispheres 15.1
2527 Male, age 74, both hemispheres 14.7
2082 Female, age 91, right hemisphere 7.3
2045 Male, age 76, both hemispheres 6.0
Hippocampus, CA2
nTPM: 15.0
1892 Male, age 76, both hemispheres 23.4
1963 Male, age 80, left hemisphere 20.8
2437 Female, age 94, left hemisphere 17.3
2249 Male, age 74, both hemispheres 12.1
1940 Female, age 85, left hemisphere 8.5
2113 Female, age 91, right hemisphere 7.9
Hippocampus, CA3
nTPM: 13.9
2436 Male, age 74, both hemispheres 23.1
1867 Male, age 76, both hemispheres 16.9
1891 Female, age 85, both hemispheres 15.3
2861 Female, age 67, both hemispheres 11.9
2137 Male, age 80, left hemisphere 11.4
2620 Female, age 94, left hemisphere 4.9
Parahippocampal cortex
nTPM: 13.3
1850 Male, age 80, both hemispheres 18.7
2245 Female, age 91, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.8
2692 Male, age 74, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.1
1933 Female, age 85, both hemispheres 12.2
2622 Female, age 67, right hemisphere 11.0
2250 Female, age 67, right hemisphere 10.3
2693 Female, age 94, both hemispheres 10.3
2018 Male, age 76, both hemispheres 9.5
Perirhinal gyrus
nTPM: 12.7
1847 Female, age 91, left hemisphere 14.5
1794 Male, age 80, right hemisphere 13.7
1841 Female, age 85, right hemisphere 13.5
2848 Male, age 76, right hemisphere 11.2
2521 Female, age 94, right hemisphere 10.9
Subiculum
nTPM: 16.0
2438 Female, age 94, left hemisphere 24.8
1901 Male, age 80, both hemispheres 21.3
1977 Female, age 85, both hemispheres 15.0
2042 Male, age 76, both hemispheres 14.1
2619 Male, age 74, both hemispheres 14.1
2729 Female, age 91, right hemisphere 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 28.6
Min nTPM: 2.7
Std nTPM: 5.2
Median nTPM: 13.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 28.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 27.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 27.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 26.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 25.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 25.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 24.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.3
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 87.0
Min nTPM: 41.5
Sample A Female 87.0
Sample B Female 56.4
Sample C Male 76.8
Sample D Male 41.5
Entorhinal cortex
nTPM: 52.9
Samples: 4

Max nTPM: 63.3
Min nTPM: 47.8
Sample A Female 51.8
Sample B Female 63.3
Sample C Male 47.8
Sample D Male 48.8
Subiculum
nTPM: 45.3
Samples: 4

Max nTPM: 54.8
Min nTPM: 41.6
Sample A Female 54.8
Sample B Female 42.6
Sample C Male 41.6
Sample D Male 42.1
Ventral hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 56.9
Min nTPM: 39.0
Sample A Female 53.9
Sample B Female 39.0
Sample C Male 44.7
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 33.9
Min nTPM: 29.6
Sample A Male 31.6
Sample B Male 31.4
Sample C Female 33.9
Sample D Female 29.6
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 43.9
Min nTPM: 32.3
Sample A Male 32.3
Sample B Male 37.1
Sample C Female 39.4
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68911013 Antisense, RP_050203_02_E12, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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