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CDC42BPB
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:44.3 nTPM
HPA:44.3 nTPM
GTEx:44.4 nTPM
FANTOM5:77.9 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:42.7 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022821
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.3
Sample id Sample description nTPM
Hippocampus
nTPM: 42.6
2529 Female, age 94, left hemisphere 44.6
1898 Male, age 80, left hemisphere 43.6
1855 Male, age 76, left hemisphere 43.2
2621 Female, age 67, right hemisphere 42.0
2148 Female, age 91, left hemisphere 41.5
1911 Female, age 85, right hemisphere 41.0
Dentate gyrus
nTPM: 39.6
2530 Female, age 94, left hemisphere 44.2
1927 Female, age 91, both hemispheres 42.7
2010 Male, age 76, both hemispheres 40.0
2528 Male, age 74, both hemispheres 37.6
2531 Female, age 67, both hemispheres 37.6
2246 Female, age 85, both hemispheres 35.7
Entorhinal gyrus
nTPM: 42.5
1787 Male, age 76, left hemisphere 45.1
2613 Female, age 94, left hemisphere 44.0
2764 Male, age 80, right hemisphere 43.8
1938 Female, age 85, left hemisphere 42.5
2117 Female, age 91, right hemisphere 40.4
2686 Male, age 75, right hemisphere 39.3
Hippocampus, CA1
nTPM: 44.3
2749 Male, age 80, left hemisphere 63.0
1873 Female, age 85, both hemispheres 44.6
2527 Male, age 74, both hemispheres 40.5
2082 Female, age 91, right hemisphere 37.6
2045 Male, age 76, both hemispheres 35.8
Hippocampus, CA2
nTPM: 41.1
1963 Male, age 80, left hemisphere 57.2
1892 Male, age 76, both hemispheres 46.8
2113 Female, age 91, right hemisphere 39.5
2437 Female, age 94, left hemisphere 37.3
1940 Female, age 85, left hemisphere 32.9
2249 Male, age 74, both hemispheres 32.6
Hippocampus, CA3
nTPM: 41.9
2137 Male, age 80, left hemisphere 59.0
2861 Female, age 67, both hemispheres 46.9
1867 Male, age 76, both hemispheres 39.9
2620 Female, age 94, left hemisphere 38.7
1891 Female, age 85, both hemispheres 37.4
2436 Male, age 74, both hemispheres 29.5
Parahippocampal cortex
nTPM: 38.2
2245 Female, age 91, both hemispheres 42.1
2532 Female, age 72, left hemisphere 39.9
2622 Female, age 67, right hemisphere 39.8
1990 Female, age 91, right hemisphere 39.1
1850 Male, age 80, both hemispheres 38.9
2018 Male, age 76, both hemispheres 38.7
1933 Female, age 85, both hemispheres 38.6
2692 Male, age 74, both hemispheres 36.8
2250 Female, age 67, right hemisphere 34.2
2693 Female, age 94, both hemispheres 34.1
Perirhinal gyrus
nTPM: 40.2
1847 Female, age 91, left hemisphere 41.6
1794 Male, age 80, right hemisphere 41.5
2521 Female, age 94, right hemisphere 40.5
2848 Male, age 76, right hemisphere 40.3
1841 Female, age 85, right hemisphere 37.2
Subiculum
nTPM: 38.3
1901 Male, age 80, both hemispheres 43.2
2042 Male, age 76, both hemispheres 41.0
1977 Female, age 85, both hemispheres 39.2
2619 Male, age 74, both hemispheres 37.2
2729 Female, age 91, right hemisphere 36.1
2438 Female, age 94, left hemisphere 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 79.8
Min nTPM: 17.8
Std nTPM: 8.7
Median nTPM: 43.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 79.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 66.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 66.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 61.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 61.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 61.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 60.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 60.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 59.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.9
FF:10153-102I9 76 years, female 84.8
FF:10169-103B7 60 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 15.0
Sample A Female 21.5
Sample B Female 21.0
Sample C Male 17.9
Sample D Male 15.0
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.2
Sample A Female 21.6
Sample B Female 19.2
Sample C Male 22.5
Sample D Male 19.2
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 24.4
Min nTPM: 16.8
Sample A Female 24.4
Sample B Female 18.5
Sample C Male 19.6
Sample D Male 16.8
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 15.4
Sample A Female 16.7
Sample B Female 15.4
Sample C Male 23.1
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.7
Samples: 4

Max nTPM: 48.7
Min nTPM: 38.1
Sample A Male 41.7
Sample B Male 42.4
Sample C Female 38.1
Sample D Female 48.7
Hippocampal formation
nTPM: 38.0
Samples: 4

Max nTPM: 44.6
Min nTPM: 35.1
Sample A Male 37.0
Sample B Male 35.1
Sample C Female 44.6
Sample D Female 35.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71579855 Antisense, RP_050915_04_B06, Mouse strain C57BL/6J (56 days, male) 1.0

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