ABOUTMENU
HELP
NEWS
CNOT7
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:17.9 nTPM
FANTOM5:44.2 Scaled Tags Per Million
Pig:42.3 nTPM
Mouse:73.7 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
2529 Female, age 94, left hemisphere 23.6
1898 Male, age 80, left hemisphere 23.0
1855 Male, age 76, left hemisphere 19.3
2621 Female, age 67, right hemisphere 17.9
1911 Female, age 85, right hemisphere 16.5
2148 Female, age 91, left hemisphere 13.4
Dentate gyrus
nTPM: 19.7
1927 Female, age 91, both hemispheres 23.8
2246 Female, age 85, both hemispheres 22.3
2530 Female, age 94, left hemisphere 21.4
2010 Male, age 76, both hemispheres 21.2
2528 Male, age 74, both hemispheres 15.2
2531 Female, age 67, both hemispheres 14.0
Entorhinal gyrus
nTPM: 18.6
1938 Female, age 85, left hemisphere 22.1
1787 Male, age 76, left hemisphere 21.3
2764 Male, age 80, right hemisphere 19.2
2613 Female, age 94, left hemisphere 16.9
2686 Male, age 75, right hemisphere 16.2
2117 Female, age 91, right hemisphere 15.8
Hippocampus, CA1
nTPM: 19.7
2749 Male, age 80, left hemisphere 26.7
1873 Female, age 85, both hemispheres 19.7
2045 Male, age 76, both hemispheres 19.2
2527 Male, age 74, both hemispheres 18.9
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 20.7
2437 Female, age 94, left hemisphere 25.4
1892 Male, age 76, both hemispheres 22.2
1963 Male, age 80, left hemisphere 21.7
1940 Female, age 85, left hemisphere 20.0
2249 Male, age 74, both hemispheres 19.2
2113 Female, age 91, right hemisphere 15.6
Hippocampus, CA3
nTPM: 19.6
2137 Male, age 80, left hemisphere 25.0
2436 Male, age 74, both hemispheres 21.4
1867 Male, age 76, both hemispheres 20.4
2620 Female, age 94, left hemisphere 19.2
1891 Female, age 85, both hemispheres 18.2
2861 Female, age 67, both hemispheres 13.0
Parahippocampal cortex
nTPM: 19.8
1850 Male, age 80, both hemispheres 26.5
2245 Female, age 91, both hemispheres 22.2
1933 Female, age 85, both hemispheres 21.2
1990 Female, age 91, right hemisphere 20.6
2532 Female, age 72, left hemisphere 20.6
2250 Female, age 67, right hemisphere 20.0
2693 Female, age 94, both hemispheres 18.7
2018 Male, age 76, both hemispheres 17.8
2622 Female, age 67, right hemisphere 16.2
2692 Male, age 74, both hemispheres 13.9
Perirhinal gyrus
nTPM: 24.2
1847 Female, age 91, left hemisphere 28.7
1841 Female, age 85, right hemisphere 26.5
1794 Male, age 80, right hemisphere 24.2
2848 Male, age 76, right hemisphere 23.2
2521 Female, age 94, right hemisphere 18.1
Subiculum
nTPM: 17.8
1977 Female, age 85, both hemispheres 22.1
1901 Male, age 80, both hemispheres 21.9
2438 Female, age 94, left hemisphere 16.9
2619 Male, age 74, both hemispheres 16.0
2042 Male, age 76, both hemispheres 15.9
2729 Female, age 91, right hemisphere 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 32.5
Min nTPM: 10.8
Std nTPM: 4.1
Median nTPM: 17.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 30.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 29.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 28.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 28.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 27.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 27.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 26.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 26.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.2
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 43.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 51.2
Min nTPM: 33.8
Sample A Female 51.2
Sample B Female 40.2
Sample C Male 44.0
Sample D Male 33.8
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 48.4
Min nTPM: 34.3
Sample A Female 41.2
Sample B Female 48.4
Sample C Male 42.5
Sample D Male 34.3
Subiculum
nTPM: 40.9
Samples: 4

Max nTPM: 51.9
Min nTPM: 36.3
Sample A Female 51.9
Sample B Female 36.3
Sample C Male 36.4
Sample D Male 38.9
Ventral hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 39.4
Min nTPM: 32.9
Sample A Female 39.4
Sample B Female 34.3
Sample C Male 32.9
Sample D Male 38.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 77.3
Min nTPM: 62.4
Sample A Male 70.9
Sample B Male 77.3
Sample C Female 74.5
Sample D Female 62.4
Hippocampal formation
nTPM: 73.7
Samples: 4

Max nTPM: 82.7
Min nTPM: 67.4
Sample A Male 82.7
Sample B Male 73.8
Sample C Female 71.0
Sample D Female 67.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
321203 Antisense, RP_040617_01_C05, Mouse strain C57BL/6J (56 days, male) 7.1
76081923 Antisense, RP_060626_01_A03, Mouse strain C57BL/6J (56 days, male) 6.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.