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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:29.7 nTPM
HPA:29.7 nTPM
GTEx:37.5 nTPM
FANTOM5:84.1 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:35.9 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021297
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
2621 Female, age 67, right hemisphere 33.0
1898 Male, age 80, left hemisphere 23.8
1855 Male, age 76, left hemisphere 23.1
2148 Female, age 91, left hemisphere 22.3
1911 Female, age 85, right hemisphere 19.9
2529 Female, age 94, left hemisphere 18.6
Dentate gyrus
nTPM: 23.5
2531 Female, age 67, both hemispheres 30.3
1927 Female, age 91, both hemispheres 28.5
2530 Female, age 94, left hemisphere 24.9
2010 Male, age 76, both hemispheres 20.3
2246 Female, age 85, both hemispheres 19.4
2528 Male, age 74, both hemispheres 17.6
Entorhinal gyrus
nTPM: 29.7
2613 Female, age 94, left hemisphere 45.1
2764 Male, age 80, right hemisphere 34.0
1938 Female, age 85, left hemisphere 27.6
1787 Male, age 76, left hemisphere 27.5
2686 Male, age 75, right hemisphere 26.2
2117 Female, age 91, right hemisphere 17.5
Hippocampus, CA1
nTPM: 25.3
2749 Male, age 80, left hemisphere 44.2
2527 Male, age 74, both hemispheres 22.7
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 20.8
2082 Female, age 91, right hemisphere 16.6
Hippocampus, CA2
nTPM: 22.8
1963 Male, age 80, left hemisphere 32.7
1892 Male, age 76, both hemispheres 28.2
2437 Female, age 94, left hemisphere 27.6
2113 Female, age 91, right hemisphere 17.0
2249 Male, age 74, both hemispheres 16.5
1940 Female, age 85, left hemisphere 14.9
Hippocampus, CA3
nTPM: 26.9
2137 Male, age 80, left hemisphere 35.9
2861 Female, age 67, both hemispheres 35.2
2620 Female, age 94, left hemisphere 33.5
1867 Male, age 76, both hemispheres 23.1
1891 Female, age 85, both hemispheres 18.0
2436 Male, age 74, both hemispheres 15.7
Parahippocampal cortex
nTPM: 26.5
2622 Female, age 67, right hemisphere 33.6
2693 Female, age 94, both hemispheres 30.6
2245 Female, age 91, both hemispheres 29.9
2532 Female, age 72, left hemisphere 28.6
1850 Male, age 80, both hemispheres 28.3
1990 Female, age 91, right hemisphere 26.3
2250 Female, age 67, right hemisphere 23.7
1933 Female, age 85, both hemispheres 22.6
2692 Male, age 74, both hemispheres 22.1
2018 Male, age 76, both hemispheres 19.3
Perirhinal gyrus
nTPM: 29.7
1794 Male, age 80, right hemisphere 33.1
1847 Female, age 91, left hemisphere 31.9
2521 Female, age 94, right hemisphere 31.8
1841 Female, age 85, right hemisphere 25.9
2848 Male, age 76, right hemisphere 25.9
Subiculum
nTPM: 21.9
2438 Female, age 94, left hemisphere 26.8
1977 Female, age 85, both hemispheres 24.2
1901 Male, age 80, both hemispheres 23.9
2619 Male, age 74, both hemispheres 23.8
2042 Male, age 76, both hemispheres 19.2
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.5
Samples: 197

Max nTPM: 67.2
Min nTPM: 10.2
Std nTPM: 11.3
Median nTPM: 37.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 64.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 61.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 60.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 58.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 58.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 56.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 55.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 55.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 55.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.1
FF:10169-103B7 60 years, female 88.9
FF:10153-102I9 76 years, female 79.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 50.7
Min nTPM: 36.7
Sample A Female 50.7
Sample B Female 47.6
Sample C Male 44.9
Sample D Male 36.7
Entorhinal cortex
nTPM: 49.5
Samples: 4

Max nTPM: 55.0
Min nTPM: 47.2
Sample A Female 55.0
Sample B Female 48.2
Sample C Male 47.7
Sample D Male 47.2
Subiculum
nTPM: 43.0
Samples: 4

Max nTPM: 52.3
Min nTPM: 36.1
Sample A Female 52.3
Sample B Female 37.9
Sample C Male 45.6
Sample D Male 36.1
Ventral hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 54.4
Min nTPM: 32.8
Sample A Female 41.3
Sample B Female 32.8
Sample C Male 54.4
Sample D Male 46.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 42.4
Min nTPM: 31.1
Sample A Male 36.2
Sample B Male 33.9
Sample C Female 31.1
Sample D Female 42.4
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 31.8
Min nTPM: 25.9
Sample A Male 25.9
Sample B Male 28.6
Sample C Female 29.1
Sample D Female 31.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69104579 Antisense, RP_050316_02_B05, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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