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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:22.2 nTPM
HPA:22.2 nTPM
GTEx:14.9 nTPM
FANTOM5:84.4 Scaled Tags Per Million
Mouse:27.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030066Antibody HPA055561Antibody CAB018582
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
2621 Female, age 67, right hemisphere 27.5
1898 Male, age 80, left hemisphere 26.5
1855 Male, age 76, left hemisphere 20.2
1911 Female, age 85, right hemisphere 17.3
2148 Female, age 91, left hemisphere 16.1
2529 Female, age 94, left hemisphere 2.9
Dentate gyrus
nTPM: 16.4
1927 Female, age 91, both hemispheres 25.4
2530 Female, age 94, left hemisphere 22.3
2010 Male, age 76, both hemispheres 21.5
2246 Female, age 85, both hemispheres 16.3
2531 Female, age 67, both hemispheres 7.1
2528 Male, age 74, both hemispheres 5.9
Entorhinal gyrus
nTPM: 22.2
2613 Female, age 94, left hemisphere 42.0
1938 Female, age 85, left hemisphere 32.8
2764 Male, age 80, right hemisphere 25.7
1787 Male, age 76, left hemisphere 16.9
2686 Male, age 75, right hemisphere 16.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 22.2
2749 Male, age 80, left hemisphere 61.4
1873 Female, age 85, both hemispheres 23.7
2527 Male, age 74, both hemispheres 18.9
2082 Female, age 91, right hemisphere 6.8
2045 Male, age 76, both hemispheres 0.4
Hippocampus, CA2
nTPM: 16.6
1963 Male, age 80, left hemisphere 35.0
1892 Male, age 76, both hemispheres 25.4
2249 Male, age 74, both hemispheres 16.3
2113 Female, age 91, right hemisphere 8.8
2437 Female, age 94, left hemisphere 7.7
1940 Female, age 85, left hemisphere 6.1
Hippocampus, CA3
nTPM: 19.7
2137 Male, age 80, left hemisphere 57.7
2861 Female, age 67, both hemispheres 17.2
2620 Female, age 94, left hemisphere 13.0
2436 Male, age 74, both hemispheres 11.9
1867 Male, age 76, both hemispheres 10.2
1891 Female, age 85, both hemispheres 8.4
Parahippocampal cortex
nTPM: 14.7
1850 Male, age 80, both hemispheres 26.6
2245 Female, age 91, both hemispheres 18.9
2622 Female, age 67, right hemisphere 18.8
1990 Female, age 91, right hemisphere 18.6
1933 Female, age 85, both hemispheres 14.3
2532 Female, age 72, left hemisphere 14.1
2692 Male, age 74, both hemispheres 13.8
2693 Female, age 94, both hemispheres 11.0
2018 Male, age 76, both hemispheres 6.7
2250 Female, age 67, right hemisphere 4.5
Perirhinal gyrus
nTPM: 18.6
1847 Female, age 91, left hemisphere 29.1
2848 Male, age 76, right hemisphere 21.6
1794 Male, age 80, right hemisphere 18.7
1841 Female, age 85, right hemisphere 18.5
2521 Female, age 94, right hemisphere 5.1
Subiculum
nTPM: 8.9
1901 Male, age 80, both hemispheres 23.2
1977 Female, age 85, both hemispheres 12.8
2042 Male, age 76, both hemispheres 7.5
2438 Female, age 94, left hemisphere 7.3
2619 Male, age 74, both hemispheres 2.4
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 50.9
Min nTPM: 0.7
Std nTPM: 10.8
Median nTPM: 12.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 50.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 46.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 42.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 41.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 37.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 37.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 35.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.4
FF:10169-103B7 60 years, female 107.7
FF:10153-102I9 76 years, female 61.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.1
Sample A Male 21.8
Sample B Male 23.3
Sample C Female 18.1
Sample D Female 23.0
Hippocampal formation
nTPM: 27.3
Samples: 4

Max nTPM: 33.4
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 33.1
Sample C Female 33.4
Sample D Female 21.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.