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TBKBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:27.3 nTPM
HPA:27.3 nTPM
GTEx:29.6 nTPM
FANTOM5:6.4 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:38.4 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062347Antibody HPA064856
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
2621 Female, age 67, right hemisphere 34.2
2148 Female, age 91, left hemisphere 31.7
2529 Female, age 94, left hemisphere 27.4
1911 Female, age 85, right hemisphere 27.0
1898 Male, age 80, left hemisphere 22.3
1855 Male, age 76, left hemisphere 21.1
Dentate gyrus
nTPM: 25.1
1927 Female, age 91, both hemispheres 36.0
2531 Female, age 67, both hemispheres 27.8
2530 Female, age 94, left hemisphere 23.4
2246 Female, age 85, both hemispheres 21.7
2010 Male, age 76, both hemispheres 21.4
2528 Male, age 74, both hemispheres 19.9
Entorhinal gyrus
nTPM: 25.2
2613 Female, age 94, left hemisphere 32.3
2686 Male, age 75, right hemisphere 31.6
1938 Female, age 85, left hemisphere 23.8
2764 Male, age 80, right hemisphere 22.6
2117 Female, age 91, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.2
Hippocampus, CA1
nTPM: 26.6
2749 Male, age 80, left hemisphere 33.2
2527 Male, age 74, both hemispheres 28.6
1873 Female, age 85, both hemispheres 26.6
2045 Male, age 76, both hemispheres 25.0
2082 Female, age 91, right hemisphere 19.8
Hippocampus, CA2
nTPM: 23.9
1963 Male, age 80, left hemisphere 36.2
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 23.9
1892 Male, age 76, both hemispheres 23.8
2249 Male, age 74, both hemispheres 19.4
1940 Female, age 85, left hemisphere 15.8
Hippocampus, CA3
nTPM: 25.4
2137 Male, age 80, left hemisphere 34.1
2861 Female, age 67, both hemispheres 33.5
1867 Male, age 76, both hemispheres 23.5
2620 Female, age 94, left hemisphere 21.7
1891 Female, age 85, both hemispheres 21.4
2436 Male, age 74, both hemispheres 18.1
Parahippocampal cortex
nTPM: 23.1
2622 Female, age 67, right hemisphere 29.5
2245 Female, age 91, both hemispheres 28.1
2692 Male, age 74, both hemispheres 24.7
2250 Female, age 67, right hemisphere 23.8
2693 Female, age 94, both hemispheres 23.5
1990 Female, age 91, right hemisphere 22.5
1933 Female, age 85, both hemispheres 21.0
1850 Male, age 80, both hemispheres 20.3
2018 Male, age 76, both hemispheres 19.9
2532 Female, age 72, left hemisphere 17.9
Perirhinal gyrus
nTPM: 20.6
1847 Female, age 91, left hemisphere 24.9
1794 Male, age 80, right hemisphere 20.5
1841 Female, age 85, right hemisphere 20.1
2848 Male, age 76, right hemisphere 18.9
2521 Female, age 94, right hemisphere 18.7
Subiculum
nTPM: 20.5
2619 Male, age 74, both hemispheres 22.3
1901 Male, age 80, both hemispheres 21.4
2729 Female, age 91, right hemisphere 20.9
1977 Female, age 85, both hemispheres 20.0
2438 Female, age 94, left hemisphere 19.8
2042 Male, age 76, both hemispheres 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 76.1
Min nTPM: 6.8
Std nTPM: 12.2
Median nTPM: 29.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 76.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 63.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 60.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 57.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 55.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 54.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 52.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 51.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 50.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 49.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.4
FF:10153-102I9 76 years, female 6.6
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.2
Sample A Female 15.9
Sample B Female 15.9
Sample C Male 12.8
Sample D Male 12.2
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 19.9
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 12.4
Sample C Male 19.9
Sample D Male 12.3
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.6
Sample A Female 18.6
Sample B Female 14.5
Sample C Male 17.3
Sample D Male 13.6
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 24.8
Min nTPM: 13.8
Sample A Female 16.1
Sample B Female 13.8
Sample C Male 24.8
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.2
Samples: 4

Max nTPM: 36.8
Min nTPM: 29.3
Sample A Male 34.4
Sample B Male 29.3
Sample C Female 36.8
Sample D Female 36.4
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 40.5
Min nTPM: 35.9
Sample A Male 40.5
Sample B Male 39.3
Sample C Female 35.9
Sample D Female 38.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
68861858 Antisense, RP_050301_01_B04, Mouse strain C57BL/6J (56 days, male) 4.1

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The Human Protein Atlas

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