ABOUTMENU
HELP
NEWS
SOWAHA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:49.7 nTPM
HPA:49.7 nTPM
GTEx:73.1 nTPM
FANTOM5:60.6 Scaled Tags Per Million
Pig:26.8 nTPM
Mouse:60.3 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064621
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.6
2621 Female, age 67, right hemisphere 60.0
2529 Female, age 94, left hemisphere 54.7
1911 Female, age 85, right hemisphere 52.0
1855 Male, age 76, left hemisphere 38.1
1898 Male, age 80, left hemisphere 36.3
2148 Female, age 91, left hemisphere 32.3
Dentate gyrus
nTPM: 45.7
2531 Female, age 67, both hemispheres 89.6
2010 Male, age 76, both hemispheres 41.1
2246 Female, age 85, both hemispheres 41.0
2528 Male, age 74, both hemispheres 39.3
1927 Female, age 91, both hemispheres 35.0
2530 Female, age 94, left hemisphere 28.4
Entorhinal gyrus
nTPM: 39.8
1787 Male, age 76, left hemisphere 61.3
2613 Female, age 94, left hemisphere 41.5
1938 Female, age 85, left hemisphere 39.9
2117 Female, age 91, right hemisphere 34.2
2764 Male, age 80, right hemisphere 32.8
2686 Male, age 75, right hemisphere 29.1
Hippocampus, CA1
nTPM: 46.0
2527 Male, age 74, both hemispheres 55.6
2749 Male, age 80, left hemisphere 53.7
2045 Male, age 76, both hemispheres 43.6
2082 Female, age 91, right hemisphere 41.8
1873 Female, age 85, both hemispheres 35.3
Hippocampus, CA2
nTPM: 36.8
2113 Female, age 91, right hemisphere 43.7
1963 Male, age 80, left hemisphere 40.7
2249 Male, age 74, both hemispheres 40.3
1892 Male, age 76, both hemispheres 34.6
1940 Female, age 85, left hemisphere 34.2
2437 Female, age 94, left hemisphere 27.0
Hippocampus, CA3
nTPM: 49.7
2861 Female, age 67, both hemispheres 71.1
2137 Male, age 80, left hemisphere 59.9
2620 Female, age 94, left hemisphere 59.9
1867 Male, age 76, both hemispheres 42.2
1891 Female, age 85, both hemispheres 34.7
2436 Male, age 74, both hemispheres 30.8
Parahippocampal cortex
nTPM: 38.6
2250 Female, age 67, right hemisphere 59.5
2018 Male, age 76, both hemispheres 55.5
2245 Female, age 91, both hemispheres 51.6
1933 Female, age 85, both hemispheres 45.3
2693 Female, age 94, both hemispheres 39.0
2622 Female, age 67, right hemisphere 32.7
2532 Female, age 72, left hemisphere 27.5
1990 Female, age 91, right hemisphere 27.2
1850 Male, age 80, both hemispheres 25.0
2692 Male, age 74, both hemispheres 23.0
Perirhinal gyrus
nTPM: 44.9
2521 Female, age 94, right hemisphere 59.5
2848 Male, age 76, right hemisphere 45.7
1847 Female, age 91, left hemisphere 42.2
1841 Female, age 85, right hemisphere 39.4
1794 Male, age 80, right hemisphere 37.5
Subiculum
nTPM: 32.5
1977 Female, age 85, both hemispheres 43.4
2042 Male, age 76, both hemispheres 38.5
2729 Female, age 91, right hemisphere 33.1
1901 Male, age 80, both hemispheres 31.4
2619 Male, age 74, both hemispheres 30.5
2438 Female, age 94, left hemisphere 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.1
Samples: 197

Max nTPM: 289.2
Min nTPM: 5.2
Std nTPM: 49.5
Median nTPM: 60.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 289.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 264.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 235.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 232.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 221.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 210.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 192.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 177.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 175.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 168.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 165.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.6
FF:10153-102I9 76 years, female 69.9
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 34.3
Min nTPM: 16.0
Sample A Female 30.9
Sample B Female 34.3
Sample C Male 16.0
Sample D Male 26.0
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 16.9
Min nTPM: 8.8
Sample A Female 14.7
Sample B Female 11.6
Sample C Male 16.9
Sample D Male 8.8
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 12.0
Sample A Female 20.5
Sample B Female 15.9
Sample C Male 15.5
Sample D Male 12.0
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 36.6
Min nTPM: 14.2
Sample A Female 14.2
Sample B Female 23.8
Sample C Male 23.2
Sample D Male 36.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 34.9
Sample A Male 39.9
Sample B Male 34.9
Sample C Female 46.2
Sample D Female 44.5
Hippocampal formation
nTPM: 60.3
Samples: 4

Max nTPM: 67.8
Min nTPM: 52.0
Sample A Male 59.9
Sample B Male 67.8
Sample C Female 61.5
Sample D Female 52.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69449020 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 7.8
71250306 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.