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RTL8A
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:25.6 nTPM
HPA:25.6 nTPM
GTEx:58.2 nTPM
FANTOM5:127.2 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 25.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 22.5
1781 Male, age 74, unknown 24.4
2481 Female, age 94, left hemisphere 23.6
2288 Male, age 75, left hemisphere 23.5
1857 Female, age 85, left hemisphere 22.7
2289 Male, age 61, right hemisphere 22.2
2290 Female, age 72, unknown 22.1
1854 Male, age 80, left hemisphere 21.2
2846 Female, age 79, unknown 19.9
Claustrum
nTPM: 21.8
2292 Female, age 85, both hemispheres 24.2
2196 Female, age 79, unknown 23.7
2284 Female, age 91, both hemispheres 22.1
1956 Male, age 74, unknown 21.9
2198 Male, age 80, both hemispheres 21.5
2568 Male, age 61, both hemispheres 21.4
2491 Male, age 75, both hemispheres 20.9
2645 Female, age 72, unknown 20.8
2392 Female, age 94, both hemispheres 19.3
Globus pallidus, externus
nTPM: 23.6
1996 Male, age 80, right hemisphere 24.8
2646 Male, age 61, right hemisphere 24.4
2772 Female, age 79, unknown 23.8
2567 Female, age 72, unknown 23.2
2395 Male, age 75, both hemispheres 21.7
Globus pallidus, internus
nTPM: 25.0
2778 Female, age 91, both hemispheres 27.3
2287 Male, age 75, right hemisphere 25.8
2483 Female, age 94, right hemisphere 24.8
1818 Male, age 74, unknown 24.6
2111 Female, age 85, right hemisphere 24.6
2037 Male, age 80, right hemisphere 24.0
2566 Female, age 72, unknown 23.5
Nucleus accumbens
nTPM: 25.6
2698 Female, age 72, unknown 29.7
2824 Male, age 61, right hemisphere 27.9
1806 Female, age 85, left hemisphere 26.8
1783 Male, age 74, unknown 26.3
1856 Female, age 91, right hemisphere 25.4
2286 Male, age 75, left hemisphere 24.0
2391 Female, age 94, left hemisphere 23.0
2732 Male, age 80, right hemisphere 22.1
Nucleus basalis of Meynert
nTPM: 21.3
2569 Male, age 61, both hemispheres 24.6
2821 Male, age 75, both hemispheres 22.4
2484 Female, age 94, left hemisphere 20.5
2393 Male, age 80, right hemisphere 17.8
Nucleus of the diagonal band
nTPM: 23.5
2195 Female, age 85, both hemispheres 26.3
1979 Male, age 74, unknown 26.1
2775 Male, age 80, right hemisphere 22.5
1812 Female, age 91, both hemispheres 22.0
2029 Male, age 61, right hemisphere 20.7
Olfactory tubercle
nTPM: 19.9
2856 Male, age 75, right hemisphere 21.0
1846 Male, age 80, right hemisphere 20.6
1998 Female, age 91, both hemispheres 19.2
2487 Female, age 94, left hemisphere 18.7
Putamen
nTPM: 20.5
2482 Female, age 94, left hemisphere 23.8
2647 Male, age 75, left hemisphere 22.9
1937 Female, age 91, right hemisphere 22.0
1838 Male, age 80, right hemisphere 21.5
1829 Male, age 74, unknown 19.6
2489 Female, age 72, unknown 17.9
2466 Female, age 79, unknown 15.6
Septal nuclei
nTPM: 21.2
2629 Female, age 94, right hemisphere 22.5
1960 Male, age 74, unknown 22.3
2059 Female, age 85, both hemispheres 22.0
2394 Male, age 61, left hemisphere 21.9
2009 Female, age 91, both hemispheres 20.0
2031 Female, age 72, unknown 20.0
2199 Male, age 80, right hemisphere 19.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 58.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.2
Samples: 246

Max nTPM: 70.4
Min nTPM: 19.1
Std nTPM: 8.6
Median nTPM: 41.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 70.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 68.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 58.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 58.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 57.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.2
Samples: 246

Max nTPM: 92.8
Min nTPM: 18.9
Std nTPM: 13.9
Median nTPM: 57.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 92.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 89.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 87.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 86.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 86.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 85.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 85.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 85.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 83.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 83.5
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Brain - Putamen (basal ganglia)
Average nTPM: 41.4
Samples: 205

Max nTPM: 76.5
Min nTPM: 24.0
Std nTPM: 8.3
Median nTPM: 40.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 76.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 73.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 67.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 62.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 62.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 60.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 57.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 56.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 102.2
FF:10164-103B2 76 years, female 102.2
Globus pallidus
Scaled Tags Per Million: 116.6
FF:10175-103C4 60 years, female 119.9
FF:10161-103A8 76 years, female 113.2
Nucleus accumbens
Scaled Tags Per Million: 121.4
FF:10037-101F1 23-56 years, mixed 121.4
Putamen
Scaled Tags Per Million: 127.2
FF:10176-103C5 60 years, female 127.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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