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GIGYF2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.5 nTPM
HPA:13.5 nTPM
GTEx:10.2 nTPM
FANTOM5:104.4 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:18.5 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059918Antibody HPA065064
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2529 Female, age 94, left hemisphere 17.0
2621 Female, age 67, right hemisphere 15.5
2148 Female, age 91, left hemisphere 14.8
1911 Female, age 85, right hemisphere 12.9
1855 Male, age 76, left hemisphere 10.2
1898 Male, age 80, left hemisphere 8.8
Dentate gyrus
nTPM: 13.5
2531 Female, age 67, both hemispheres 15.9
2246 Female, age 85, both hemispheres 13.9
2530 Female, age 94, left hemisphere 13.9
1927 Female, age 91, both hemispheres 13.0
2528 Male, age 74, both hemispheres 12.6
2010 Male, age 76, both hemispheres 11.5
Entorhinal gyrus
nTPM: 11.9
2686 Male, age 75, right hemisphere 14.1
2117 Female, age 91, right hemisphere 12.8
2764 Male, age 80, right hemisphere 12.2
2613 Female, age 94, left hemisphere 11.1
1938 Female, age 85, left hemisphere 10.8
1787 Male, age 76, left hemisphere 10.1
Hippocampus, CA1
nTPM: 13.1
1873 Female, age 85, both hemispheres 15.3
2045 Male, age 76, both hemispheres 15.0
2527 Male, age 74, both hemispheres 13.7
2082 Female, age 91, right hemisphere 11.1
2749 Male, age 80, left hemisphere 10.4
Hippocampus, CA2
nTPM: 11.5
2437 Female, age 94, left hemisphere 14.1
2113 Female, age 91, right hemisphere 12.5
1963 Male, age 80, left hemisphere 12.4
1940 Female, age 85, left hemisphere 10.3
1892 Male, age 76, both hemispheres 10.2
2249 Male, age 74, both hemispheres 9.2
Hippocampus, CA3
nTPM: 11.7
1891 Female, age 85, both hemispheres 15.9
2861 Female, age 67, both hemispheres 14.4
2620 Female, age 94, left hemisphere 11.2
2137 Male, age 80, left hemisphere 10.9
1867 Male, age 76, both hemispheres 9.4
2436 Male, age 74, both hemispheres 8.5
Parahippocampal cortex
nTPM: 12.1
2692 Male, age 74, both hemispheres 15.4
2693 Female, age 94, both hemispheres 13.1
2018 Male, age 76, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.6
2622 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.0
1850 Male, age 80, both hemispheres 11.5
1990 Female, age 91, right hemisphere 10.7
1933 Female, age 85, both hemispheres 10.0
2250 Female, age 67, right hemisphere 9.8
Perirhinal gyrus
nTPM: 10.5
2848 Male, age 76, right hemisphere 12.1
1841 Female, age 85, right hemisphere 11.4
1794 Male, age 80, right hemisphere 10.0
1847 Female, age 91, left hemisphere 9.7
2521 Female, age 94, right hemisphere 9.2
Subiculum
nTPM: 13.1
2438 Female, age 94, left hemisphere 17.1
2729 Female, age 91, right hemisphere 13.9
2042 Male, age 76, both hemispheres 13.0
1901 Male, age 80, both hemispheres 12.1
2619 Male, age 74, both hemispheres 11.9
1977 Female, age 85, both hemispheres 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 18.4
Min nTPM: 2.7
Std nTPM: 3.0
Median nTPM: 10.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 16.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 16.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 16.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 15.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 15.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 15.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.4
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 97.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.1
Sample A Female 27.0
Sample B Female 23.7
Sample C Male 24.1
Sample D Male 21.1
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 26.4
Min nTPM: 22.1
Sample A Female 26.4
Sample B Female 22.7
Sample C Male 22.1
Sample D Male 23.3
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 28.0
Min nTPM: 20.5
Sample A Female 28.0
Sample B Female 21.1
Sample C Male 21.7
Sample D Male 20.5
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 18.7
Sample A Female 20.8
Sample B Female 18.7
Sample C Male 24.8
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 22.7
Min nTPM: 16.9
Sample A Male 17.4
Sample B Male 16.9
Sample C Female 16.9
Sample D Female 22.7
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 21.5
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 21.5
Sample C Female 20.2
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69169965 Antisense, RP_050321_04_E08, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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