ABOUTMENU
HELP
NEWS
BRD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.0 nTPM
HPA:3.0 nTPM
GTEx:55.7 nTPM
FANTOM5:93.2 Scaled Tags Per Million
Pig:76.0 nTPM
Mouse:120.3 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042816
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.0
Sample id Sample description nTPM
Hippocampus
nTPM: 1.8
2621 Female, age 67, right hemisphere 5.0
1898 Male, age 80, left hemisphere 2.4
1855 Male, age 76, left hemisphere 2.1
1911 Female, age 85, right hemisphere 1.4
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 0.9
2010 Male, age 76, both hemispheres 2.7
2530 Female, age 94, left hemisphere 2.4
2246 Female, age 85, both hemispheres 0.3
2528 Male, age 74, both hemispheres 0.1
1927 Female, age 91, both hemispheres 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 1.0
2613 Female, age 94, left hemisphere 2.6
1938 Female, age 85, left hemisphere 1.1
1787 Male, age 76, left hemisphere 1.0
2686 Male, age 75, right hemisphere 0.9
2764 Male, age 80, right hemisphere 0.3
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 3.0
2749 Male, age 80, left hemisphere 10.4
1873 Female, age 85, both hemispheres 2.4
2527 Male, age 74, both hemispheres 1.7
2045 Male, age 76, both hemispheres 0.8
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 0.3
2437 Female, age 94, left hemisphere 1.0
1963 Male, age 80, left hemisphere 0.6
1892 Male, age 76, both hemispheres 0.1
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 1.2
2137 Male, age 80, left hemisphere 4.3
2436 Male, age 74, both hemispheres 1.1
1867 Male, age 76, both hemispheres 0.7
2620 Female, age 94, left hemisphere 0.6
2861 Female, age 67, both hemispheres 0.3
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.8
2692 Male, age 74, both hemispheres 2.5
2693 Female, age 94, both hemispheres 1.6
2245 Female, age 91, both hemispheres 1.5
2250 Female, age 67, right hemisphere 1.1
1850 Male, age 80, both hemispheres 0.7
2622 Female, age 67, right hemisphere 0.7
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2532 Female, age 72, left hemisphere 0.0
Perirhinal gyrus
nTPM: 0.8
2521 Female, age 94, right hemisphere 1.9
1794 Male, age 80, right hemisphere 0.9
1847 Female, age 91, left hemisphere 0.8
1841 Female, age 85, right hemisphere 0.4
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 1.5
2042 Male, age 76, both hemispheres 4.0
1901 Male, age 80, both hemispheres 2.4
2619 Male, age 74, both hemispheres 2.4
1977 Female, age 85, both hemispheres 0.2
2438 Female, age 94, left hemisphere 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.7
Samples: 197

Max nTPM: 120.5
Min nTPM: 27.9
Std nTPM: 12.5
Median nTPM: 53.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 120.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 99.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 93.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 90.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 89.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 85.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 81.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 79.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 78.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 78.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 77.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.2
FF:10153-102I9 76 years, female 98.6
FF:10169-103B7 60 years, female 87.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.4
Samples: 4

Max nTPM: 86.8
Min nTPM: 60.3
Sample A Female 86.8
Sample B Female 81.6
Sample C Male 72.9
Sample D Male 60.3
Entorhinal cortex
nTPM: 64.2
Samples: 4

Max nTPM: 69.1
Min nTPM: 58.6
Sample A Female 69.1
Sample B Female 63.0
Sample C Male 65.9
Sample D Male 58.6
Subiculum
nTPM: 66.6
Samples: 4

Max nTPM: 76.0
Min nTPM: 60.5
Sample A Female 76.0
Sample B Female 60.5
Sample C Male 66.1
Sample D Male 63.7
Ventral hippocampus
nTPM: 76.1
Samples: 4

Max nTPM: 89.7
Min nTPM: 53.8
Sample A Female 71.6
Sample B Female 53.8
Sample C Male 89.7
Sample D Male 89.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.3
Samples: 4

Max nTPM: 124.3
Min nTPM: 115.5
Sample A Male 124.3
Sample B Male 115.5
Sample C Female 117.5
Sample D Female 123.9
Hippocampal formation
nTPM: 116.8
Samples: 4

Max nTPM: 120.2
Min nTPM: 114.4
Sample A Male 120.2
Sample B Male 117.0
Sample C Female 115.6
Sample D Female 114.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
70305496 Antisense, RP_050609_04_C12, Mouse strain C57BL/6J (56 days, male) 7.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.