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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:7.2 nTPM
HPA:7.2 nTPM
GTEx:8.2 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Pig:6.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000727
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.2
Sample id Sample description nTPM
Hippocampus
nTPM: 6.0
2148 Female, age 91, left hemisphere 6.4
1898 Male, age 80, left hemisphere 6.3
1911 Female, age 85, right hemisphere 6.3
1855 Male, age 76, left hemisphere 5.8
2621 Female, age 67, right hemisphere 5.7
2529 Female, age 94, left hemisphere 5.4
Dentate gyrus
nTPM: 6.1
1927 Female, age 91, both hemispheres 7.3
2531 Female, age 67, both hemispheres 6.6
2246 Female, age 85, both hemispheres 6.1
2528 Male, age 74, both hemispheres 5.9
2010 Male, age 76, both hemispheres 5.6
2530 Female, age 94, left hemisphere 4.9
Entorhinal gyrus
nTPM: 6.6
1938 Female, age 85, left hemisphere 7.4
2613 Female, age 94, left hemisphere 7.2
2764 Male, age 80, right hemisphere 6.6
1787 Male, age 76, left hemisphere 6.3
2686 Male, age 75, right hemisphere 6.2
2117 Female, age 91, right hemisphere 5.6
Hippocampus, CA1
nTPM: 6.5
2749 Male, age 80, left hemisphere 7.6
1873 Female, age 85, both hemispheres 6.7
2045 Male, age 76, both hemispheres 6.6
2527 Male, age 74, both hemispheres 6.5
2082 Female, age 91, right hemisphere 5.3
Hippocampus, CA2
nTPM: 6.4
1892 Male, age 76, both hemispheres 7.8
1963 Male, age 80, left hemisphere 6.8
2249 Male, age 74, both hemispheres 6.0
2437 Female, age 94, left hemisphere 6.0
1940 Female, age 85, left hemisphere 5.8
2113 Female, age 91, right hemisphere 5.7
Hippocampus, CA3
nTPM: 6.5
2137 Male, age 80, left hemisphere 7.2
1891 Female, age 85, both hemispheres 6.9
2620 Female, age 94, left hemisphere 6.7
1867 Male, age 76, both hemispheres 6.6
2861 Female, age 67, both hemispheres 6.0
2436 Male, age 74, both hemispheres 5.8
Parahippocampal cortex
nTPM: 6.5
2693 Female, age 94, both hemispheres 7.2
1850 Male, age 80, both hemispheres 7.1
1933 Female, age 85, both hemispheres 7.0
1990 Female, age 91, right hemisphere 6.8
2250 Female, age 67, right hemisphere 6.6
2245 Female, age 91, both hemispheres 6.3
2692 Male, age 74, both hemispheres 6.2
2532 Female, age 72, left hemisphere 6.0
2622 Female, age 67, right hemisphere 5.9
2018 Male, age 76, both hemispheres 5.6
Perirhinal gyrus
nTPM: 7.2
1841 Female, age 85, right hemisphere 7.5
1847 Female, age 91, left hemisphere 7.5
1794 Male, age 80, right hemisphere 7.3
2848 Male, age 76, right hemisphere 7.0
2521 Female, age 94, right hemisphere 6.7
Subiculum
nTPM: 5.9
1977 Female, age 85, both hemispheres 6.9
2729 Female, age 91, right hemisphere 6.3
1901 Male, age 80, both hemispheres 6.0
2042 Male, age 76, both hemispheres 5.5
2619 Male, age 74, both hemispheres 5.5
2438 Female, age 94, left hemisphere 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.2
Samples: 197

Max nTPM: 17.5
Min nTPM: 2.0
Std nTPM: 2.5
Median nTPM: 8.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 16.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 14.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 13.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 13.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 13.8
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 13.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 13.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 13.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.1
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.4
Sample A Female 6.2
Sample B Female 6.3
Sample C Male 5.4
Sample D Male 5.7
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.3
Sample A Female 5.6
Sample B Female 6.7
Sample C Male 6.3
Sample D Male 5.3
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.5
Sample A Female 6.7
Sample B Female 6.2
Sample C Male 5.9
Sample D Male 5.5
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.8
Sample A Female 5.8
Sample B Female 6.3
Sample C Male 4.8
Sample D Male 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.