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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.9 nTPM
HPA:34.9 nTPM
GTEx:31.6 nTPM
FANTOM5:115.3 Scaled Tags Per Million
Mouse:66.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.9
Sample id Sample description nTPM
Hippocampus
nTPM: 34.3
1855 Male, age 76, left hemisphere 36.5
2621 Female, age 67, right hemisphere 35.4
1898 Male, age 80, left hemisphere 34.9
2529 Female, age 94, left hemisphere 33.9
1911 Female, age 85, right hemisphere 33.1
2148 Female, age 91, left hemisphere 32.0
Dentate gyrus
nTPM: 34.6
2010 Male, age 76, both hemispheres 36.7
2530 Female, age 94, left hemisphere 36.4
2246 Female, age 85, both hemispheres 34.3
2528 Male, age 74, both hemispheres 33.8
1927 Female, age 91, both hemispheres 33.6
2531 Female, age 67, both hemispheres 32.9
Entorhinal gyrus
nTPM: 33.5
2764 Male, age 80, right hemisphere 34.7
1938 Female, age 85, left hemisphere 34.4
1787 Male, age 76, left hemisphere 33.9
2117 Female, age 91, right hemisphere 33.5
2613 Female, age 94, left hemisphere 32.7
2686 Male, age 75, right hemisphere 31.9
Hippocampus, CA1
nTPM: 34.8
2749 Male, age 80, left hemisphere 38.6
1873 Female, age 85, both hemispheres 36.9
2527 Male, age 74, both hemispheres 34.2
2045 Male, age 76, both hemispheres 33.4
2082 Female, age 91, right hemisphere 31.0
Hippocampus, CA2
nTPM: 34.0
1892 Male, age 76, both hemispheres 37.0
1963 Male, age 80, left hemisphere 35.3
2437 Female, age 94, left hemisphere 34.2
2249 Male, age 74, both hemispheres 34.0
1940 Female, age 85, left hemisphere 32.0
2113 Female, age 91, right hemisphere 31.4
Hippocampus, CA3
nTPM: 32.4
2436 Male, age 74, both hemispheres 35.0
1867 Male, age 76, both hemispheres 33.4
1891 Female, age 85, both hemispheres 32.6
2137 Male, age 80, left hemisphere 32.5
2620 Female, age 94, left hemisphere 30.9
2861 Female, age 67, both hemispheres 30.0
Parahippocampal cortex
nTPM: 33.7
1850 Male, age 80, both hemispheres 35.6
1933 Female, age 85, both hemispheres 35.2
2245 Female, age 91, both hemispheres 35.1
2018 Male, age 76, both hemispheres 34.4
2250 Female, age 67, right hemisphere 34.2
1990 Female, age 91, right hemisphere 33.7
2532 Female, age 72, left hemisphere 33.4
2693 Female, age 94, both hemispheres 32.2
2622 Female, age 67, right hemisphere 31.9
2692 Male, age 74, both hemispheres 31.1
Perirhinal gyrus
nTPM: 34.9
1847 Female, age 91, left hemisphere 36.2
1841 Female, age 85, right hemisphere 35.5
1794 Male, age 80, right hemisphere 35.4
2521 Female, age 94, right hemisphere 33.8
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 32.3
1977 Female, age 85, both hemispheres 35.6
2619 Male, age 74, both hemispheres 32.6
1901 Male, age 80, both hemispheres 31.9
2042 Male, age 76, both hemispheres 31.8
2438 Female, age 94, left hemisphere 31.3
2729 Female, age 91, right hemisphere 30.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.6
Samples: 197

Max nTPM: 54.3
Min nTPM: 17.1
Std nTPM: 7.8
Median nTPM: 29.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 54.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 53.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 51.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 50.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 49.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 49.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 49.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 48.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 47.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.3
FF:10169-103B7 60 years, female 139.1
FF:10153-102I9 76 years, female 91.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.6
Samples: 4

Max nTPM: 75.9
Min nTPM: 60.8
Sample A Male 60.8
Sample B Male 62.8
Sample C Female 66.7
Sample D Female 75.9
Hippocampal formation
nTPM: 55.8
Samples: 4

Max nTPM: 67.7
Min nTPM: 48.3
Sample A Male 67.7
Sample B Male 48.3
Sample C Female 48.6
Sample D Female 58.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71022870 Antisense, RP_050719_01_F11, Mouse strain C57BL/6J (56 days, male) 1.3
72283725 Antisense, RP_051019_02_A05, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.