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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:4.0 nTPM
HPA:4.0 nTPM
GTEx:77.4 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:89.5 nTPM
Mouse:84.1 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073355
Glial cells High
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.0
Sample id Sample description nTPM
Hippocampus
nTPM: 2.8
1898 Male, age 80, left hemisphere 3.4
2529 Female, age 94, left hemisphere 2.9
2148 Female, age 91, left hemisphere 2.7
1911 Female, age 85, right hemisphere 2.6
2621 Female, age 67, right hemisphere 2.6
1855 Male, age 76, left hemisphere 2.4
Dentate gyrus
nTPM: 3.2
2531 Female, age 67, both hemispheres 5.5
2530 Female, age 94, left hemisphere 3.4
1927 Female, age 91, both hemispheres 2.7
2246 Female, age 85, both hemispheres 2.6
2528 Male, age 74, both hemispheres 2.6
2010 Male, age 76, both hemispheres 2.4
Entorhinal gyrus
nTPM: 4.0
1787 Male, age 76, left hemisphere 7.3
2613 Female, age 94, left hemisphere 5.2
2764 Male, age 80, right hemisphere 3.8
2117 Female, age 91, right hemisphere 2.7
1938 Female, age 85, left hemisphere 2.6
2686 Male, age 75, right hemisphere 2.6
Hippocampus, CA1
nTPM: 3.1
2749 Male, age 80, left hemisphere 5.0
2082 Female, age 91, right hemisphere 2.7
1873 Female, age 85, both hemispheres 2.6
2527 Male, age 74, both hemispheres 2.6
2045 Male, age 76, both hemispheres 2.4
Hippocampus, CA2
nTPM: 2.9
1963 Male, age 80, left hemisphere 3.5
2437 Female, age 94, left hemisphere 3.5
2113 Female, age 91, right hemisphere 2.7
1940 Female, age 85, left hemisphere 2.6
2249 Male, age 74, both hemispheres 2.6
1892 Male, age 76, both hemispheres 2.4
Hippocampus, CA3
nTPM: 2.9
2137 Male, age 80, left hemisphere 4.1
2620 Female, age 94, left hemisphere 2.9
1891 Female, age 85, both hemispheres 2.6
2436 Male, age 74, both hemispheres 2.6
2861 Female, age 67, both hemispheres 2.6
1867 Male, age 76, both hemispheres 2.4
Parahippocampal cortex
nTPM: 3.3
2250 Female, age 67, right hemisphere 6.8
2532 Female, age 72, left hemisphere 3.6
1850 Male, age 80, both hemispheres 3.4
2693 Female, age 94, both hemispheres 3.3
1990 Female, age 91, right hemisphere 2.7
2245 Female, age 91, both hemispheres 2.7
1933 Female, age 85, both hemispheres 2.6
2622 Female, age 67, right hemisphere 2.6
2692 Male, age 74, both hemispheres 2.6
2018 Male, age 76, both hemispheres 2.4
Perirhinal gyrus
nTPM: 2.9
1841 Female, age 85, right hemisphere 3.6
2521 Female, age 94, right hemisphere 2.9
1847 Female, age 91, left hemisphere 2.7
1794 Male, age 80, right hemisphere 2.6
2848 Male, age 76, right hemisphere 2.4
Subiculum
nTPM: 3.1
2438 Female, age 94, left hemisphere 4.7
1901 Male, age 80, both hemispheres 3.3
2729 Female, age 91, right hemisphere 2.7
1977 Female, age 85, both hemispheres 2.6
2619 Male, age 74, both hemispheres 2.6
2042 Male, age 76, both hemispheres 2.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.4
Samples: 197

Max nTPM: 123.6
Min nTPM: 35.1
Std nTPM: 16.3
Median nTPM: 74.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 123.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 121.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 116.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 112.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 111.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 109.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 108.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 108.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 108.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 107.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 37.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 89.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.4
Samples: 4

Max nTPM: 108.3
Min nTPM: 68.4
Sample A Female 108.3
Sample B Female 88.8
Sample C Male 80.1
Sample D Male 68.4
Entorhinal cortex
nTPM: 75.4
Samples: 4

Max nTPM: 83.1
Min nTPM: 64.6
Sample A Female 81.1
Sample B Female 64.6
Sample C Male 83.1
Sample D Male 72.7
Subiculum
nTPM: 79.8
Samples: 4

Max nTPM: 102.0
Min nTPM: 67.9
Sample A Female 102.0
Sample B Female 67.9
Sample C Male 81.2
Sample D Male 68.2
Ventral hippocampus
nTPM: 89.5
Samples: 4

Max nTPM: 121.3
Min nTPM: 56.4
Sample A Female 84.3
Sample B Female 56.4
Sample C Male 121.3
Sample D Male 96.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.9
Samples: 4

Max nTPM: 99.3
Min nTPM: 76.4
Sample A Male 77.1
Sample B Male 76.4
Sample C Female 78.7
Sample D Female 99.3
Hippocampal formation
nTPM: 84.2
Samples: 4

Max nTPM: 91.2
Min nTPM: 75.6
Sample A Male 75.6
Sample B Male 81.7
Sample C Female 91.2
Sample D Female 88.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68269682 Antisense, RP_041129_02_A08, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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