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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.8 nTPM
HPA:35.8 nTPM
GTEx:39.6 nTPM
FANTOM5:63.7 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:22.7 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007187
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 35.2
1855 Male, age 76, left hemisphere 36.1
2621 Female, age 67, right hemisphere 35.7
1898 Male, age 80, left hemisphere 35.4
2529 Female, age 94, left hemisphere 35.0
1911 Female, age 85, right hemisphere 34.8
2148 Female, age 91, left hemisphere 34.2
Dentate gyrus
nTPM: 34.9
2530 Female, age 94, left hemisphere 36.5
2010 Male, age 76, both hemispheres 36.2
2528 Male, age 74, both hemispheres 35.4
2246 Female, age 85, both hemispheres 34.9
1927 Female, age 91, both hemispheres 33.7
2531 Female, age 67, both hemispheres 32.9
Entorhinal gyrus
nTPM: 34.3
1938 Female, age 85, left hemisphere 36.5
2117 Female, age 91, right hemisphere 35.5
1787 Male, age 76, left hemisphere 35.2
2686 Male, age 75, right hemisphere 33.3
2613 Female, age 94, left hemisphere 33.0
2764 Male, age 80, right hemisphere 32.5
Hippocampus, CA1
nTPM: 34.3
2527 Male, age 74, both hemispheres 37.2
2082 Female, age 91, right hemisphere 34.4
1873 Female, age 85, both hemispheres 34.3
2749 Male, age 80, left hemisphere 33.4
2045 Male, age 76, both hemispheres 32.4
Hippocampus, CA2
nTPM: 35.8
2249 Male, age 74, both hemispheres 38.0
1963 Male, age 80, left hemisphere 36.8
2437 Female, age 94, left hemisphere 36.4
1892 Male, age 76, both hemispheres 34.8
1940 Female, age 85, left hemisphere 34.7
2113 Female, age 91, right hemisphere 34.4
Hippocampus, CA3
nTPM: 34.1
2436 Male, age 74, both hemispheres 35.7
1867 Male, age 76, both hemispheres 34.5
1891 Female, age 85, both hemispheres 34.1
2861 Female, age 67, both hemispheres 33.9
2620 Female, age 94, left hemisphere 33.7
2137 Male, age 80, left hemisphere 32.4
Parahippocampal cortex
nTPM: 34.1
1850 Male, age 80, both hemispheres 35.5
2250 Female, age 67, right hemisphere 35.2
2692 Male, age 74, both hemispheres 35.1
1990 Female, age 91, right hemisphere 34.9
2245 Female, age 91, both hemispheres 34.9
2532 Female, age 72, left hemisphere 34.2
2622 Female, age 67, right hemisphere 34.0
1933 Female, age 85, both hemispheres 33.0
2018 Male, age 76, both hemispheres 32.2
2693 Female, age 94, both hemispheres 32.0
Perirhinal gyrus
nTPM: 35.6
1794 Male, age 80, right hemisphere 37.5
1847 Female, age 91, left hemisphere 35.9
1841 Female, age 85, right hemisphere 35.3
2521 Female, age 94, right hemisphere 35.3
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 34.5
2729 Female, age 91, right hemisphere 36.0
1977 Female, age 85, both hemispheres 34.6
1901 Male, age 80, both hemispheres 34.3
2042 Male, age 76, both hemispheres 34.3
2438 Female, age 94, left hemisphere 33.9
2619 Male, age 74, both hemispheres 33.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.6
Samples: 197

Max nTPM: 83.0
Min nTPM: 20.9
Std nTPM: 9.2
Median nTPM: 38.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 75.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 69.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 60.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 59.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 58.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 58.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 53.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.7
FF:10169-103B7 60 years, female 81.6
FF:10153-102I9 76 years, female 45.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 16.5
Min nTPM: 7.7
Sample A Female 16.5
Sample B Female 11.4
Sample C Male 12.7
Sample D Male 7.7
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.3
Sample A Female 9.8
Sample B Female 10.5
Sample C Male 10.8
Sample D Male 7.3
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.9
Sample A Female 13.5
Sample B Female 9.8
Sample C Male 9.2
Sample D Male 8.9
Ventral hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.2
Sample A Female 12.6
Sample B Female 9.2
Sample C Male 16.3
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 25.6
Min nTPM: 19.3
Sample A Male 21.4
Sample B Male 25.6
Sample C Female 19.3
Sample D Female 24.5
Hippocampal formation
nTPM: 22.4
Samples: 4

Max nTPM: 24.1
Min nTPM: 21.6
Sample A Male 24.1
Sample B Male 21.6
Sample C Female 21.6
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
68744910 Antisense, RP_050208_01_H04, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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